RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 CTAGE1Q96RT6 745 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 POLDIP3Q9BY77 421 aaKnown RBP4.04□□□□□ -1.76
MDM2-227ENST00000540709 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.04□□□□□ -1.76
MDM2-227ENST00000540709 ARHGAP39Q9C0H5 1083 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 MAP6D1Q9H9H5 199 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 ARNT2Q9HBZ2 717 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 SLC25A13Q9UJS0 675 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 NFU1Q9UMS0 254 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 COPG1Q9Y678 874 aaKnown RBP4.04□□□□□ -1.76
MDM2-227ENST00000540709 C4orf47A7E2U8 309 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 BECN2A8MW95 431 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 MCIDASD6RGH6 385 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 PRR23D1E9PI22 279 aaPredicted RBP4.03□□□□□ -1.76
MDM2-227ENST00000540709 CYP3A4P08684 503 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 PRR23D2P0DMB1 279 aaPredicted RBP4.03□□□□□ -1.76
MDM2-227ENST00000540709 IGFBP2P18065 325 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 PPM1AP35813 382 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 SLC16A2P36021 539 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 PCYT1AP49585 367 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 Q5PR19 223 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 ATPAF1Q5TC12 328 aaPredicted RBP4.03□□□□□ -1.76
MDM2-227ENST00000540709 TRILQ7L0X0 811 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 IGFN1Q86VF2 1251 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 TMEM200AQ86VY9 491 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 SLC25A41Q8N5S1 370 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 DPP10Q8N608 796 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 TXNRD2Q9NNW7 524 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 OBP2BQ9NPH6 170 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 KRCC1Q9NPI7 259 aaPredicted RBP4.03□□□□□ -1.76
MDM2-227ENST00000540709 LIN7CQ9NUP9 197 aaKnown RBP4.03□□□□□ -1.76
MDM2-227ENST00000540709 PCDHA7Q9UN72 937 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 CNTN6Q9UQ52 1028 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 PTGDR2Q9Y5Y4 395 aa4.03□□□□□ -1.76
MDM2-227ENST00000540709 CYP3A7-CYP3A51PA0A087WV96 503 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 OR6C75A6NL08 312 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 SLC38A8A6NNN8 435 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 PAPSS2O95340 614 aaPredicted RBP4.02□□□□□ -1.77
MDM2-227ENST00000540709 LARGE1O95461 756 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 LCKP06239 509 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 IFIT2P09913 472 aaKnown RBP4.02□□□□□ -1.77
MDM2-227ENST00000540709 CYP3A7P24462 503 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 STAT1P42224 750 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 PCP4P48539 62 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 CYP2J2P51589 502 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 RCAN1P53805 252 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 ADPRHP54922 357 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 NFATC4Q14934 902 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 ASIC2Q16515 512 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 PRAMEF19Q5SWL8 479 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 ASPHD1Q5U4P2 390 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 PDXDC1Q6P996 788 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 SLC30A9Q6PML9 568 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 KIAA1324Q6UXG2 1013 aaKnown RBP4.02□□□□□ -1.77
MDM2-227ENST00000540709 SYNE3Q6ZMZ3 975 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 KDELC2Q7Z4H8 507 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 CAMK1DQ8IU85 385 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 ADHFE1Q8IWW8 467 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 VPS52Q8N1B4 723 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 EXD3Q8N9H8 876 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 LRRC57Q8N9N7 239 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 ZNF527Q8NB42 609 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 FAM110DQ8TAY7 271 aaPredicted RBP4.02□□□□□ -1.77
MDM2-227ENST00000540709 KCNJ9Q92806 393 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 LMLNQ96KR4 655 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 PCGF6Q9BYE7 350 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 TP63Q9H3D4 680 aaPredicted RBP4.02□□□□□ -1.77
MDM2-227ENST00000540709 IL21RQ9HBE5 538 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 PNRC2Q9NPJ4 139 aaKnown RBP4.02□□□□□ -1.77
MDM2-227ENST00000540709 NLRC4Q9NPP4 1024 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 PLK2Q9NYY3 685 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 RAP2CQ9Y3L5 183 aa4.02□□□□□ -1.77
MDM2-227ENST00000540709 KCNJ18B7U540 433 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 PRSS44E7EML9 344 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 FFAR2O15552 330 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 KLKB1P03952 638 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 RFX2P48378 723 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 POLE2P56282 527 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 ROR2Q01974 943 aaKnown RBP4.01□□□□□ -1.77
MDM2-227ENST00000540709 BTKQ06187 659 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 LTBQ06643 244 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 SPARCL1Q14515 664 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 INO80DQ53TQ3 878 aaPredicted RBP4.01□□□□□ -1.77
MDM2-227ENST00000540709 OTUD1Q5VV17 481 aaPredicted RBP4.01□□□□□ -1.77
MDM2-227ENST00000540709 ZNF324BQ6AW86 544 aaPredicted RBP4.01□□□□□ -1.77
MDM2-227ENST00000540709 XRRA1Q6P2D8 792 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 AAGABQ6PD74 315 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 RTL10Q7L3V2 364 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 SPATA2LQ8IUW3 424 aaPredicted RBP4.01□□□□□ -1.77
MDM2-227ENST00000540709 CCDC117Q8IWD4 279 aaPredicted RBP4.01□□□□□ -1.77
MDM2-227ENST00000540709 DCP1BQ8IZD4 617 aaKnown RBP4.01□□□□□ -1.77
MDM2-227ENST00000540709 CADM3Q8N126 398 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 GABPB2Q8TAK5 448 aaPredicted RBP4.01□□□□□ -1.77
MDM2-227ENST00000540709 TMEM41AQ96HV5 264 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 ELAC2Q9BQ52 826 aaKnown RBP4.01□□□□□ -1.77
MDM2-227ENST00000540709 HDHD5Q9BXW7 423 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 SEZ6LQ9BYH1 1024 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 PLAC1Q9HBJ0 212 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 PDE11AQ9HCR9 933 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 DTX4Q9Y2E6 619 aa4.01□□□□□ -1.77
MDM2-227ENST00000540709 LRCH1Q9Y2L9 728 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms