RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 HTR4Q13639 388 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 LONRF1Q17RB8 773 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 SKIDA1Q1XH10 827 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 SPATA2LQ8IUW3 424 aaPredicted RBP12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 ZBED8Q8IZ13 594 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 ATP11CQ8NB49 1132 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 PYROXD1Q8WU10 500 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 RNF139Q8WU17 664 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 FGF14Q92915 247 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 C9orf72Q96LT7 481 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 PWWP2AQ96N64 755 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 QKIQ96PU8 341 aaKnown RBP eCLIP12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 KCNK16Q96T55 309 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 PRRX2Q99811 253 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 RPP25Q9BUL9 199 aaKnown RBP12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 ADAM33Q9BZ11 813 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 XPO7Q9UIA9 1087 aaKnown RBP12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 SLC27A5Q9Y2P5 690 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 USP3Q9Y6I4 520 aa12.29□□□□□ -0.44
CYB561A3-215ENST00000540317 DENND4AQ7Z401 1863 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 YJEFN3A6XGL0 299 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 E7ENQ6 273 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 ZNF197O14709 1029 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 SPAG6O75602 509 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 USP17L7P0C7H9 530 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 SRFP11831 508 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 NCAM1P13591 858 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 BDNFP23560 247 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 RBL1P28749 1068 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 SLCO1A2P46721 670 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 ATXN1P54253 815 aaKnown RBP12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 NME3Q13232 169 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 KCNJ11Q14654 390 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 PDK1Q15118 436 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 SLC5A9Q2M3M2 681 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 OTUD1Q5VV17 481 aaPredicted RBP12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 NCBP2-AS2Q69YL0 99 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 ASTLQ6HA08 431 aaPredicted RBP12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 MTSS1LQ765P7 747 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 NPAS3Q8IXF0 933 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 BCAS4Q8TDM0 211 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 TFB1MQ8WVM0 346 aaKnown RBP12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 NDRG1Q92597 394 aaKnown RBP12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 FUBP3Q96I24 572 aaKnown RBP eCLIP12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 BRD8Q9H0E9 1235 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 WNT16Q9UBV4 365 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 SLC24A2Q9UI40 661 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 CA14Q9ULX7 337 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 NAALADL1Q9UQQ1 740 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 DOCK6Q96HP0 2047 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 TSC2P49815 1807 aa12.28□□□□□ -0.44
CYB561A3-215ENST00000540317 EXOC1LA0A1B0GW35 172 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 EEF2KO00418 725 aaKnown RBP12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 NCAM2O15394 837 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 FYNP06241 537 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 MYL4P12829 197 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 GOT1P17174 413 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 ALDH1A3P47895 512 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 CXCR3P49682 368 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 EPHB3P54753 998 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 IFI35P80217 286 aaPredicted RBP12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 SARNPP82979 210 aaKnown RBP12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 PAFAH1B3Q15102 231 aaKnown RBP12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 NFE2Q16621 373 aaPredicted RBP12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 KLHL38Q2WGJ6 581 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 CCDC38Q502W7 563 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 SLC39A12Q504Y0 691 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 UBAP2Q5T6F2 1119 aaKnown RBP12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 SYPL2Q5VXT5 272 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 HEATR6Q6AI08 1181 aaKnown RBP12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 GPRIN1Q7Z2K8 1008 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 TADA2BQ86TJ2 420 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 HS6ST3Q8IZP7 471 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 ATAD1Q8NBU5 361 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 MCUQ8NE86 351 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 GPR152Q8TDT2 470 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 ARHGEF2Q92974 986 aaKnown RBP12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 LRRC39Q96DD0 335 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 TCEAL4Q96EI5 215 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 OLFM3Q96PB7 478 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 TMEM209Q96SK2 561 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 KXD1Q9BQD3 176 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 C10orf88Q9H8K7 445 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 VPS37BQ9H9H4 285 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 LRRC4CQ9HCJ2 640 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 ARHGEF4Q9NR80 690 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 RAB6BQ9NRW1 208 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 PIGVQ9NUD9 493 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 GDE1Q9NZC3 331 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 DTLQ9NZJ0 730 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 SENP1Q9P0U3 644 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 WDFY4Q6ZS81 3184 aa12.27□□□□□ -0.44
CYB561A3-215ENST00000540317 ZNF318Q5VUA4 2279 aa12.27□□□□□ -0.45
CYB561A3-215ENST00000540317 GMNCA6NCL1 334 aa12.26□□□□□ -0.45
CYB561A3-215ENST00000540317 PPP1R12AO14974 1030 aaPredicted RBP12.26□□□□□ -0.45
CYB561A3-215ENST00000540317 GSTA2P09210 222 aa12.26□□□□□ -0.45
CYB561A3-215ENST00000540317 CEBPBP17676 345 aa12.26□□□□□ -0.45
CYB561A3-215ENST00000540317 TPSB2P20231 275 aa12.26□□□□□ -0.45
CYB561A3-215ENST00000540317 AMPD1P23109 780 aa12.26□□□□□ -0.45
CYB561A3-215ENST00000540317 HTR7P34969 479 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms