RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 USP36Q9P275 1121 aaKnown RBP15.51■□□□□ 0.07
UBE3B-212ENST00000540230 ZNF212Q9UDV6 495 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 PAXBP1Q9Y5B6 917 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 OR51B4Q9Y5P0 310 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 NUMA1Q14980 2115 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 ATXN2Q99700 1313 aaKnown RBP15.5■□□□□ 0.07
UBE3B-212ENST00000540230 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-212ENST00000540230 BCLAF3A2AJT9 711 aaKnown RBP15.5■□□□□ 0.07
UBE3B-212ENST00000540230 FAM72CH0Y354 149 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 ZBTB24O43167 697 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-212ENST00000540230 MAP3K13O43283 966 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 GDF9O60383 454 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 SRGAP2O75044 1071 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 LRP3O75074 770 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 ZNF217O75362 1048 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 CLDN11O75508 207 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 MOCS3O95396 460 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 ADRA1BP35368 520 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 PLK1P53350 603 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 ECT2LQ008S8 904 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 RPL6Q02878 288 aaKnown RBP15.5■□□□□ 0.07
UBE3B-212ENST00000540230 ZNF177Q13360 481 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-212ENST00000540230 E2F5Q15329 346 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 CSRP2Q16527 193 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 FAM72AQ5TYM5 149 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 FAM72DQ6L9T8 149 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 FAM72BQ86X60 149 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 RMDN1Q96DB5 314 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 FEM1AQ9BSK4 669 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 TRIM7Q9C029 511 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 CAPN11Q9UMQ6 739 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 NEU3Q9UQ49 428 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 TBC1D30Q9Y2I9 924 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 PCDHGA5Q9Y5G8 931 aa15.5■□□□□ 0.07
UBE3B-212ENST00000540230 PATE3B3GLJ2 98 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 SIN3BO75182 1162 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 VAV1P15498 845 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 TPMTP51580 245 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 ST8SIA6P61647 398 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 MAMLD1Q13495 774 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 SLC12A1Q13621 1099 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 BYSLQ13895 437 aaKnown RBP15.49■□□□□ 0.07
UBE3B-212ENST00000540230 HNRNPA1L2Q32P51 320 aaKnown RBP15.49■□□□□ 0.07
UBE3B-212ENST00000540230 TDRD12Q587J7 1177 aaKnown RBP15.49■□□□□ 0.07
UBE3B-212ENST00000540230 MANEALQ5VSG8 457 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 RNF219Q5W0B1 726 aaPredicted RBP15.49■□□□□ 0.07
UBE3B-212ENST00000540230 PLEKHA7Q6IQ23 1121 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 LPCAT2Q7L5N7 544 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 METTL3Q86U44 580 aaKnown RBP15.49■□□□□ 0.07
UBE3B-212ENST00000540230 SLC41A1Q8IVJ1 513 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 PRCCQ92733 491 aaPredicted RBP15.49■□□□□ 0.07
UBE3B-212ENST00000540230 PSMB7Q99436 277 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 ITM2CQ9NQX7 267 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 TMEM74BQ9NUR3 256 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 ITIH6Q6UXX5 1313 aa15.49■□□□□ 0.07
UBE3B-212ENST00000540230 A0A0D9SEW6 157 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 FTLP02792 175 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-212ENST00000540230 RHOCP08134 193 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 SRPRAP08240 638 aaKnown RBP15.48■□□□□ 0.07
UBE3B-212ENST00000540230 ZNF806P0C7X5 589 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 GZMAP12544 262 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 CASP14P31944 242 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 ZNF143P52747 638 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-212ENST00000540230 RPS14P62263 151 aaKnown RBP15.48■□□□□ 0.07
UBE3B-212ENST00000540230 ZBED6P86452 979 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 ZNF252P-AS1Q0IIN9 211 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 LRRC31Q6UY01 552 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 CYP2U1Q7Z449 544 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 PYROXD2Q8N2H3 581 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 GPR161Q8N6U8 529 aaKnown RBP15.48■□□□□ 0.07
UBE3B-212ENST00000540230 PTPRN2Q92932 1015 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 VCPIP1Q96JH7 1222 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 NDFIP2Q9NV92 336 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 WSB2Q9NYS7 404 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-212ENST00000540230 SNAP91O60641 907 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 C7P10643 843 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 ITPKAP23677 461 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 C9orf64Q5T6V5 341 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 DCUN1D2Q6PH85 259 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 SLC36A4Q6YBV0 504 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 KDM1BQ8NB78 822 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 OR7D4Q8NG98 312 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 FRS2Q8WU20 508 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 PIGKQ92643 395 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 TOE1Q96GM8 510 aaKnown RBP15.48■□□□□ 0.07
UBE3B-212ENST00000540230 CNPY3Q9BT09 278 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 ZYG11BQ9C0D3 744 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 MUC3BQ9H195 1237 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 TMEM51Q9NW97 253 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 ARHGAP20Q9P2F6 1191 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 CNOT8Q9UFF9 292 aaKnown RBP15.48■□□□□ 0.07
UBE3B-212ENST00000540230 OR12D3Q9UGF7 316 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 SUN2Q9UH99 717 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 ADAMTS1Q9UHI8 967 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 VPS28Q9UK41 221 aa15.48■□□□□ 0.07
UBE3B-212ENST00000540230 LUC7L2Q9Y383 392 aaKnown RBP15.48■□□□□ 0.07
UBE3B-212ENST00000540230 CHD5Q8TDI0 1954 aa15.47■□□□□ 0.07
UBE3B-212ENST00000540230 AP5Z1O43299 807 aa15.47■□□□□ 0.07
UBE3B-212ENST00000540230 RTN2O75298 545 aa15.47■□□□□ 0.07
UBE3B-212ENST00000540230 LRIG2O94898 1065 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms