RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 LRRC39Q96DD0 335 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 MAML3Q96JK9 1138 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 SCYL1Q96KG9 808 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 CPA4Q9UI42 421 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 BRCA1P38398 1863 aaKnown RBP13.98□□□□□ -0.17
BNIP3-202ENST00000540159 A0A0G2JMZ2 1700 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 LRRC37A2A6NM11 1700 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 GLRA3O75311 464 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 CPA3P15088 417 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 NPR3P17342 541 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 PTPN1P18031 435 aaKnown RBP13.97□□□□□ -0.17
BNIP3-202ENST00000540159 PGAM1P18669 254 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 TCN1P20061 433 aaPredicted RBP13.97□□□□□ -0.17
BNIP3-202ENST00000540159 PTPN3P26045 913 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 NMBRP28336 390 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 SERPINB9P50453 376 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 CCNG1P51959 295 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 CACNB2Q08289 660 aaPredicted RBP13.97□□□□□ -0.17
BNIP3-202ENST00000540159 CCL14Q16627 93 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 EFHC1Q5JVL4 640 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 C6orf163Q5TEZ5 329 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 LRRC8BQ6P9F7 803 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 OR52B2Q96RD2 323 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 GAD1Q99259 594 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.97□□□□□ -0.17
BNIP3-202ENST00000540159 ZBTB14O43829 449 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 TM7SF2O76062 418 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 SERPINA6P08185 405 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 MPSTP25325 297 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 CTBP1Q13363 440 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 IFNLR1Q8IU57 520 aaPredicted RBP13.97□□□□□ -0.17
BNIP3-202ENST00000540159 RNF135Q8IUD6 432 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 ARHGAP24Q8N264 748 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 TINF2Q9BSI4 451 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 KATNBL1Q9H079 304 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 COG4Q9H9E3 785 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 NDE1Q9NXR1 346 aa13.97□□□□□ -0.17
BNIP3-202ENST00000540159 STX18Q9P2W9 335 aaKnown RBP13.97□□□□□ -0.17
BNIP3-202ENST00000540159 A0A088AWK7 358 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 PIRO00625 290 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 MOCS2O96007 188 aaPredicted RBP13.96□□□□□ -0.17
BNIP3-202ENST00000540159 MT-CO1P00395 513 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 LMNAP02545 664 aaKnown RBP13.96□□□□□ -0.17
BNIP3-202ENST00000540159 FYNP06241 537 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 SETSIPP0DME0 302 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 SKIP12755 728 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 CCNA1P78396 465 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 DUSP28Q4G0W2 176 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 NOMO2Q5JPE7 1267 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 ARHGAP17Q68EM7 881 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 USP13Q92995 863 aaPredicted RBP13.96□□□□□ -0.17
BNIP3-202ENST00000540159 TUBB6Q9BUF5 446 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 FRMD8Q9BZ67 464 aaPredicted RBP13.96□□□□□ -0.17
BNIP3-202ENST00000540159 VTA1Q9NP79 307 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 MORF4L1Q9UBU8 362 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 SOX13Q9UN79 622 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 TMEM233B4DJY2 109 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 HNRNPCL1O60812 293 aaKnown RBP13.96□□□□□ -0.17
BNIP3-202ENST00000540159 SP100P23497 879 aaPredicted RBP13.96□□□□□ -0.17
BNIP3-202ENST00000540159 EPHX2P34913 555 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 COPAP53621 1224 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 SNX16P57768 344 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 TUBB3Q13509 450 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 PDK1Q15118 436 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 UNC93AQ86WB7 457 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 DENND6AQ8IWF6 608 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 LRRC52Q8N7C0 313 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 PCED1BQ96HM7 432 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 SGIP1Q9BQI5 828 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 GORASP1Q9BQQ3 440 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 FTHL17Q9BXU8 183 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 DUSP16Q9BY84 665 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 NUF2Q9BZD4 464 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 TASP1Q9H6P5 420 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 CRTAC1Q9NQ79 661 aa13.96□□□□□ -0.17
BNIP3-202ENST00000540159 SERPINE1P05121 402 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 JUNP05412 331 aaKnown RBP13.96□□□□□ -0.18
BNIP3-202ENST00000540159 ACADSP16219 412 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 CD68P34810 354 aaPredicted RBP13.96□□□□□ -0.18
BNIP3-202ENST00000540159 FDFT1P37268 417 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 GP5P40197 560 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 MAGEA6P43360 314 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 CLCNKBP51801 687 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 POLE2P56282 527 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 ABCE1P61221 599 aaKnown RBP13.96□□□□□ -0.18
BNIP3-202ENST00000540159 POU5F1BQ06416 359 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 ASPHQ12797 758 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 PDCD2Q16342 344 aaPredicted RBP13.96□□□□□ -0.18
BNIP3-202ENST00000540159 MARK2Q7KZI7 788 aaKnown RBP13.96□□□□□ -0.18
BNIP3-202ENST00000540159 ZNF410Q86VK4 478 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 CCNYL1Q8N7R7 359 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 C3orf58Q8NDZ4 430 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 IPMKQ8NFU5 416 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 WNT8BQ93098 351 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 FAM136AQ96C01 138 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 TNIP3Q96KP6 325 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 ZNF184Q99676 751 aaPredicted RBP13.96□□□□□ -0.18
BNIP3-202ENST00000540159 TKTL2Q9H0I9 626 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 BFARQ9NZS9 450 aa13.96□□□□□ -0.18
BNIP3-202ENST00000540159 CORO1CQ9ULV4 474 aaPredicted RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms