RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 DGKIO75912 1065 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 UPP2O95045 317 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 CHRNA1P02708 482 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 ASLP04424 464 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 CAPNS1P04632 268 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 CALB1P05937 261 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 MYL2P10916 166 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 BMP2P12643 396 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 VAV1P15498 845 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 ATF7P17544 494 aaPredicted RBP7.87□□□□□ -1.15
CCDC60-204ENST00000539847 TBXAS1P24557 533 aaPredicted RBP7.87□□□□□ -1.15
CCDC60-204ENST00000539847 CCNFP41002 786 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 PIK3CAP42336 1068 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 PRR20EP86478 221 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 PRR20CP86479 221 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 PRR20DP86480 221 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 PRR20BP86481 221 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 PRR20AP86496 221 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 UBE3AQ05086 875 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 CYP24A1Q07973 514 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 USP41Q3LFD5 358 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 TFDP3Q5H9I0 405 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 WDR44Q5JSH3 913 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 KLC3Q6P597 504 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 XKR5Q6UX68 686 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 SPOCD1Q6ZMY3 1216 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 TSHZ1Q6ZSZ6 1077 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 SV2AQ7L0J3 742 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 NLRX1Q86UT6 975 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 CPNE8Q86YQ8 564 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 PALM2Q8IXS6 379 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 KBTBD2Q8IY47 623 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 THNSL1Q8IYQ7 743 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 ULK2Q8IYT8 1036 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 ZBED8Q8IZ13 594 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 CRIPAKQ8N1N5 446 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 MARVELD2Q8N4S9 558 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 EFHBQ8N7U6 833 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 CATSPER1Q8NEC5 780 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 IL31RAQ8NI17 732 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 TRPC4APQ8TEL6 797 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 STON2Q8WXE9 905 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 LRRC39Q96DD0 335 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 SNX27Q96L92 541 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 PWWP2AQ96N64 755 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 CATSPER2Q96P56 530 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 PAFAH2Q99487 392 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 MXRA8Q9BRK3 442 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 CBWD1Q9BRT8 395 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 LXNQ9BS40 222 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 ZNF577Q9BSK1 485 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 CCDC106Q9BWC9 280 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 KLHL4Q9C0H6 718 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 UNC45AQ9H3U1 944 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 Q9H521 79 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 BCAS3Q9H6U6 928 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 ARHGEF4Q9NR80 690 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 TBC1D22BQ9NU19 505 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 SETD4Q9NVD3 440 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 DNAJC17Q9NVM6 304 aaKnown RBP7.87□□□□□ -1.15
CCDC60-204ENST00000539847 ZDHHC3Q9NYG2 299 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 BCAP29Q9UHQ4 241 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 ITGA11Q9UKX5 1188 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 DNPEPQ9ULA0 475 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 TBX20Q9UMR3 447 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 SOX13Q9UN79 622 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 PLLPQ9Y342 182 aa7.87□□□□□ -1.15
CCDC60-204ENST00000539847 ZFHX2Q9C0A1 2572 aaPredicted RBP7.86□□□□□ -1.15
CCDC60-204ENST00000539847 ARHGAP10A1A4S6 786 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 RRN3P2A6NIE6 340 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 H0YJX3 145 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 ENPP3O14638 875 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 GRM6O15303 877 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 MAFGO15525 162 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 DKC1O60832 514 aaKnown RBP eCLIP7.86□□□□□ -1.15
CCDC60-204ENST00000539847 SNNO75324 88 aaPredicted RBP7.86□□□□□ -1.15
CCDC60-204ENST00000539847 KRT37O76014 449 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 ADRB2P07550 413 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 KRT7P08729 469 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 SNRPAP09012 282 aaKnown RBP7.86□□□□□ -1.15
CCDC60-204ENST00000539847 STAG3L1P0CL83 205 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 RHOQP17081 205 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 VCLP18206 1134 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 ACO1P21399 889 aaKnown RBP7.86□□□□□ -1.15
CCDC60-204ENST00000539847 MMP8P22894 467 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 GLRA2P23416 452 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 CNTFP26441 200 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 HOXA13P31271 388 aaPredicted RBP7.86□□□□□ -1.15
CCDC60-204ENST00000539847 MAGEA6P43360 314 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 QARSP47897 775 aaKnown RBP7.86□□□□□ -1.15
CCDC60-204ENST00000539847 RARRES1P49788 294 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 IDH3AP50213 366 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 SERPINB8P50452 374 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 SERPINB9P50453 376 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 CHN2P52757 468 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 AP3M2P53677 418 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 SESN3P58005 492 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 TAS2R40P59535 323 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 NOMO3P69849 1222 aa7.86□□□□□ -1.15
CCDC60-204ENST00000539847 MRPS9P82933 396 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms