RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 RAPGEF1Q13905 1077 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 IQCB1Q15051 598 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 CNGA2Q16280 664 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 FILIP1LQ4L180 1135 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 HES3Q5TGS1 186 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 BSPRYQ5W0U4 402 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 MMAAQ8IVH4 418 aaKnown RBP15.47■□□□□ 0.07
USB1-203ENST00000539737 SCUBE3Q8IX30 993 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 SLC39A7Q92504 469 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 GOLGA1Q92805 767 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 TMA16Q96EY4 203 aaKnown RBP15.47■□□□□ 0.07
USB1-203ENST00000539737 SLC2A11Q9BYW1 496 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 NEUROG2Q9H2A3 272 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 PABPC3Q9H361 631 aaKnown RBP15.47■□□□□ 0.07
USB1-203ENST00000539737 CBX8Q9HC52 389 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 FBXL12Q9NXK8 326 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 NYNRINQ9P2P1 1898 aaKnown RBP15.47■□□□□ 0.07
USB1-203ENST00000539737 PLA2G4CQ9UP65 541 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 CA5BQ9Y2D0 317 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 FHOD1Q9Y613 1164 aa15.47■□□□□ 0.07
USB1-203ENST00000539737 TTC34A8MYJ7 566 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 GOLGA6L19H0YKK7 550 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 RNF225M0QZC1 329 aaPredicted RBP15.46■□□□□ 0.07
USB1-203ENST00000539737 JUPP14923 745 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 PSMD8P48556 350 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 HARS2P49590 506 aaKnown RBP15.46■□□□□ 0.07
USB1-203ENST00000539737 ACADVLP49748 655 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 GALCP54803 685 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 PPP2CBP62714 309 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 RPS24P62847 133 aaKnown RBP15.46■□□□□ 0.07
USB1-203ENST00000539737 PPP2CAP67775 309 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 UBXN1Q04323 297 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 FAM133BQ5BKY9 247 aaKnown RBP15.46■□□□□ 0.07
USB1-203ENST00000539737 FSCBQ5H9T9 825 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 ZNF776Q68DI1 518 aaPredicted RBP15.46■□□□□ 0.07
USB1-203ENST00000539737 DPY19L2P1Q6NXN4 242 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 APTXQ7Z2E3 356 aaKnown RBP15.46■□□□□ 0.07
USB1-203ENST00000539737 KIAA0907Q7Z7F0 614 aaPredicted RBP15.46■□□□□ 0.07
USB1-203ENST00000539737 CFAP52Q8N1V2 620 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 TFAP2BQ92481 460 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 LMLNQ96KR4 655 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 MRGPRX3Q96LB0 322 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 ERGIC2Q96RQ1 377 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 PRORYQ9H606 182 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 AASDHPPTQ9NRN7 309 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 XPO7Q9UIA9 1087 aaKnown RBP15.46■□□□□ 0.07
USB1-203ENST00000539737 AJAP1Q9UKB5 411 aaPredicted RBP15.46■□□□□ 0.07
USB1-203ENST00000539737 AK5Q9Y6K8 562 aa15.46■□□□□ 0.07
USB1-203ENST00000539737 THAP12O43422 761 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 SDC3O75056 442 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 RNASEH2AO75792 299 aaKnown RBP15.45■□□□□ 0.06
USB1-203ENST00000539737 LDOC1O95751 146 aaPredicted RBP15.45■□□□□ 0.06
USB1-203ENST00000539737 DLDP09622 509 aaKnown RBP15.45■□□□□ 0.06
USB1-203ENST00000539737 CSKP41240 450 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 BPIFB4P59827 614 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 SYCP1Q15431 976 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 PKDCCQ504Y2 493 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 PM20D1Q6GTS8 502 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 PCSK4Q6UW60 755 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 AHI1Q8N157 1196 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 AADATQ8N5Z0 425 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.45■□□□□ 0.06
USB1-203ENST00000539737 WFIKKN2Q8TEU8 576 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 COL26A1Q96A83 441 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 NAF1Q96HR8 494 aaKnown RBP15.45■□□□□ 0.06
USB1-203ENST00000539737 PCMTD1Q96MG8 357 aaPredicted RBP15.45■□□□□ 0.06
USB1-203ENST00000539737 FCRL3Q96P31 734 aaPredicted RBP15.45■□□□□ 0.06
USB1-203ENST00000539737 ELF4Q99607 663 aaPredicted RBP15.45■□□□□ 0.06
USB1-203ENST00000539737 ZSWIM1Q9BR11 485 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 NAA15Q9BXJ9 866 aaKnown RBP15.45■□□□□ 0.06
USB1-203ENST00000539737 ACE2Q9BYF1 805 aaPredicted RBP15.45■□□□□ 0.06
USB1-203ENST00000539737 PCED1AQ9H1Q7 454 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 RSPH9Q9H1X1 276 aaPredicted RBP15.45■□□□□ 0.06
USB1-203ENST00000539737 GANQ9H2C0 597 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 FAM207AQ9NSI2 230 aaPredicted RBP15.45■□□□□ 0.06
USB1-203ENST00000539737 SIK3Q9Y2K2 1263 aa15.45■□□□□ 0.06
USB1-203ENST00000539737 A0A1W2PPC4 97 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 A0A1W2PR77 199 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 VILLO15195 856 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 TIMM44O43615 452 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 RFPL3O75679 317 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 ITGAVP06756 1048 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 MYF5P13349 255 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 POLR2EP19388 210 aaKnown RBP15.44■□□□□ 0.06
USB1-203ENST00000539737 ABCB4P21439 1286 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 STK19P49842 368 aaPredicted RBP15.44■□□□□ 0.06
USB1-203ENST00000539737 PTK2Q05397 1052 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 CCDC173Q0VFZ6 552 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 DRAP1Q14919 205 aaPredicted RBP15.44■□□□□ 0.06
USB1-203ENST00000539737 POM121L1PQ3SYA9 428 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 TTC31Q49AM3 519 aaPredicted RBP15.44■□□□□ 0.06
USB1-203ENST00000539737 ADGRF1Q5T601 910 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 PIK3R6Q5UE93 754 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 LUZP1Q86V48 1076 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 SPATS2Q86XZ4 545 aaKnown RBP15.44■□□□□ 0.06
USB1-203ENST00000539737 FAM71AQ8IYT1 594 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 CARNMT1Q8N4J0 409 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 NEK11Q8NG66 645 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 SAP25Q8TEE9 199 aa15.44■□□□□ 0.06
USB1-203ENST00000539737 KCTD13Q8WZ19 329 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 350.1 ms