RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 PAIP2Q9BPZ3 127 aaKnown RBP17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 PRDM16Q9HAZ2 1276 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 TXLNGQ9NUQ3 528 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 SLC38A8A6NNN8 435 aa17.52■□□□□ 0.4
PCDHB17P-201ENST00000539533 TMEM63AO94886 807 aa17.52■□□□□ 0.4
PCDHB17P-201ENST00000539533 MOCS2O96007 188 aaPredicted RBP17.52■□□□□ 0.4
PCDHB17P-201ENST00000539533 ABHD2P08910 425 aa17.52■□□□□ 0.4
PCDHB17P-201ENST00000539533 VAV1P15498 845 aa17.52■□□□□ 0.4
PCDHB17P-201ENST00000539533 DNAJB2P25686 324 aa17.52■□□□□ 0.4
PCDHB17P-201ENST00000539533 EPHB2P29323 1055 aa17.52■□□□□ 0.4
PCDHB17P-201ENST00000539533 MAGEA4P43358 317 aa17.52■□□□□ 0.4
PCDHB17P-201ENST00000539533 BRMS1LQ5PSV4 323 aa17.52■□□□□ 0.4
PCDHB17P-201ENST00000539533 ZNF461Q8TAF7 563 aa17.52■□□□□ 0.4
PCDHB17P-201ENST00000539533 SERPINB11Q96P15 392 aa17.52■□□□□ 0.4
PCDHB17P-201ENST00000539533 OSBPL2Q9H1P3 480 aa17.52■□□□□ 0.4
PCDHB17P-201ENST00000539533 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.52■□□□□ 0.4
PCDHB17P-201ENST00000539533 WFS1O76024 890 aa17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 MTM1Q13496 603 aa17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 PPP2R5DQ14738 602 aa17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 FASTKD3Q14CZ7 662 aaKnown RBP17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 FAXCQ5TGI0 409 aa17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 HEATR6Q6AI08 1181 aaKnown RBP17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 MSANTD2Q6P1R3 559 aa17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 VPS52Q8N1B4 723 aa17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 NPWQ8N729 165 aa17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 UTP4Q969X6 686 aaKnown RBP17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 HAPLN3Q96S86 360 aa17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 MYLK2Q9H1R3 596 aa17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 PRDM12Q9H4Q4 367 aa17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 SAYSD1Q9NPB0 183 aa17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 TLR8Q9NR97 1041 aaKnown RBP17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 RAB6BQ9NRW1 208 aa17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 CXXC1Q9P0U4 656 aaPredicted RBP17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 PAK5Q9P286 719 aa17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 STARD13Q9Y3M8 1113 aa17.52■□□□□ 0.39
PCDHB17P-201ENST00000539533 KCNU1A8MYU2 1149 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 BANF1O75531 89 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 ABLIM3O94929 683 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 ASMTLO95671 621 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 AP1B1Q10567 949 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 DDX53Q86TM3 631 aaKnown RBP17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 CCNYQ8ND76 341 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 HTR3CQ8WXA8 447 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 FCRL2Q96LA5 508 aaPredicted RBP17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 HERC2P3Q9BVR0 1158 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 FOXP3Q9BZS1 431 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 MCOLN1Q9GZU1 580 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 CLIC5Q9NZA1 410 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 AFF4Q9UHB7 1163 aaKnown RBP17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 EXOC1LA0A1B0GW35 172 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 SPAG7O75391 227 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 FGBP02675 491 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 TUFMP49411 452 aaKnown RBP17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 NR1H3Q13133 447 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 SETDB1Q15047 1291 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 ANKRD20A2Q5SQ80 823 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 FNBP1LQ5T0N5 605 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 ANKRD20A1Q5TYW2 823 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 ANKRD20A3Q5VUR7 823 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 RWDD4Q6NW29 188 aaKnown RBP17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 TRABD2AQ86V40 505 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 MIB1Q86YT6 1006 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 SLC39A13Q96H72 371 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 CCSER2Q9H7U1 834 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 TLR6Q9Y2C9 796 aa17.51■□□□□ 0.39
PCDHB17P-201ENST00000539533 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 ENO4A6NNW6 628 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 HACD1B0YJ81 288 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 GCATO75600 419 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 GCAP28676 217 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 CCNG1P51959 295 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 DNAJC3Q13217 504 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 MSS51Q4VC12 460 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 C10orf120Q5SQS8 335 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 ARTNQ5T4W7 220 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 CEP128Q6ZU80 1094 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 ERP27Q96DN0 273 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 LRMDAQ9H2I8 198 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 CYP4F11Q9HBI6 524 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 PRKAG2Q9UGJ0 569 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 PHTF1Q9UMS5 762 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 NEU3Q9UQ49 428 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 NDC80O14777 642 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 ATP5HO75947 161 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 GJB5O95377 273 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 METTL18O95568 372 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 URODP06132 367 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 ZDHHC11BP0C7U3 371 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 TBX4P57082 545 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 KCNJ11Q14654 390 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 PDK1Q15118 436 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 PRKD1Q15139 912 aaPredicted RBP17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 PARP6Q2NL67 630 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 DENND1AQ8TEH3 1009 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 SPOCK2Q92563 424 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 P2RY11Q96G91 374 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 SH3GL3Q99963 347 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 CEP41Q9BYV8 373 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 CHKBQ9Y259 395 aa17.5■□□□□ 0.39
PCDHB17P-201ENST00000539533 HS3ST4Q9Y661 456 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms