RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 TP53INP2Q8IXH6 220 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 ETFBKMTQ8IXQ9 262 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 CCDC33Q8N5R6 958 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 KIF18AQ8NI77 898 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 CHFRQ96EP1 664 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 RETREG1Q9H6L5 497 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 DNAJC17Q9NVM6 304 aaKnown RBP24.13■■□□□ 1.45
TMEM260-202ENST00000538838 SAE1Q9UBE0 346 aaPredicted RBP24.13■■□□□ 1.45
TMEM260-202ENST00000538838 TBC1D30Q9Y2I9 924 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 HEY1Q9Y5J3 304 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 SHROOM3Q8TF72 1996 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 TRIM24O15164 1050 aa24.12■■□□□ 1.45
TMEM260-202ENST00000538838 URI1O94763 535 aaPredicted RBP24.12■■□□□ 1.45
TMEM260-202ENST00000538838 SRFP11831 508 aa24.12■■□□□ 1.45
TMEM260-202ENST00000538838 ZFXP17010 805 aaPredicted RBP24.12■■□□□ 1.45
TMEM260-202ENST00000538838 SERPINB6P35237 376 aa24.12■■□□□ 1.45
TMEM260-202ENST00000538838 C6orf118Q5T5N4 469 aa24.12■■□□□ 1.45
TMEM260-202ENST00000538838 CCDC181Q5TID7 509 aa24.12■■□□□ 1.45
TMEM260-202ENST00000538838 NAIF1Q69YI7 327 aaPredicted RBP24.12■■□□□ 1.45
TMEM260-202ENST00000538838 SETD3Q86TU7 594 aaPredicted RBP24.12■■□□□ 1.45
TMEM260-202ENST00000538838 CCDC117Q8IWD4 279 aaPredicted RBP24.12■■□□□ 1.45
TMEM260-202ENST00000538838 ARHGAP12Q8IWW6 846 aa24.12■■□□□ 1.45
TMEM260-202ENST00000538838 UMODL1-AS1Q8N2C9 162 aa24.12■■□□□ 1.45
TMEM260-202ENST00000538838 FIBINQ8TAL6 211 aa24.12■■□□□ 1.45
TMEM260-202ENST00000538838 DNASE1L2Q92874 299 aa24.12■■□□□ 1.45
TMEM260-202ENST00000538838 XPO6Q96QU8 1125 aaKnown RBP24.12■■□□□ 1.45
TMEM260-202ENST00000538838 PGRMC1O00264 195 aaKnown RBP24.11■■□□□ 1.45
TMEM260-202ENST00000538838 TULP3O75386 442 aa24.11■■□□□ 1.45
TMEM260-202ENST00000538838 CD70P32970 193 aa24.11■■□□□ 1.45
TMEM260-202ENST00000538838 LMAN2Q12907 356 aa24.11■■□□□ 1.45
TMEM260-202ENST00000538838 LONRF2Q1L5Z9 754 aa24.11■■□□□ 1.45
TMEM260-202ENST00000538838 CREG2Q8IUH2 290 aa24.11■■□□□ 1.45
TMEM260-202ENST00000538838 LRRC19Q9H756 370 aa24.11■■□□□ 1.45
TMEM260-202ENST00000538838 PRDM16Q9HAZ2 1276 aa24.11■■□□□ 1.45
TMEM260-202ENST00000538838 TRPV5Q9NQA5 729 aa24.11■■□□□ 1.45
TMEM260-202ENST00000538838 DTLQ9NZJ0 730 aa24.11■■□□□ 1.45
TMEM260-202ENST00000538838 RAMP2O60895 175 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 TGM2P21980 687 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 HLA-FP30511 346 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 OPRD1P41143 372 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 CSKP41240 450 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 SLC6A11P48066 632 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 SLC10A2Q12908 348 aaPredicted RBP24.1■■□□□ 1.45
TMEM260-202ENST00000538838 IER5LQ5T953 404 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 RNF219Q5W0B1 726 aaPredicted RBP24.1■■□□□ 1.45
TMEM260-202ENST00000538838 AFMIDQ63HM1 303 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 ACTRT1Q8TDG2 376 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 FAM118BQ9BPY3 351 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 SLC2A4RGQ9NR83 387 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 HEBP1Q9NRV9 189 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 ABCB8Q9NUT2 735 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 DONSONQ9NYP3 566 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 TTC7AQ9ULT0 858 aaPredicted RBP24.1■■□□□ 1.45
TMEM260-202ENST00000538838 DUSP12Q9UNI6 340 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 R3HDM2Q9Y2K5 976 aaKnown RBP24.1■■□□□ 1.45
TMEM260-202ENST00000538838 A0A0D9SEW6 157 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 APOC4-APOC2K7ER74 178 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 APOC2P02655 101 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 MZF1P28698 734 aaPredicted RBP24.1■■□□□ 1.45
TMEM260-202ENST00000538838 NDST2P52849 883 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 GNA12Q03113 381 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 KDSRQ06136 332 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 MESP2Q0VG99 397 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 RNF135Q8IUD6 432 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 LZTR1Q8N653 840 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 OR7D4Q8NG98 312 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 HMCESQ96FZ2 354 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 LMLNQ96KR4 655 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 SLC2A11Q9BYW1 496 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 SLC39A8Q9C0K1 460 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 FBXO10Q9UK96 956 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 SORCS3Q9UPU3 1222 aa24.1■■□□□ 1.45
TMEM260-202ENST00000538838 ILVBLA1L0T0 632 aa24.09■■□□□ 1.45
TMEM260-202ENST00000538838 RASA4BC9J798 803 aa24.09■■□□□ 1.45
TMEM260-202ENST00000538838 DFFAO00273 331 aa24.09■■□□□ 1.45
TMEM260-202ENST00000538838 RASA4O43374 803 aa24.09■■□□□ 1.45
TMEM260-202ENST00000538838 ACVRL1P37023 503 aa24.09■■□□□ 1.45
TMEM260-202ENST00000538838 DGKGP49619 791 aa24.09■■□□□ 1.45
TMEM260-202ENST00000538838 PFKPQ01813 784 aa24.09■■□□□ 1.45
TMEM260-202ENST00000538838 POLD3Q15054 466 aaPredicted RBP24.09■■□□□ 1.45
TMEM260-202ENST00000538838 SIX1Q15475 284 aaPredicted RBP24.09■■□□□ 1.45
TMEM260-202ENST00000538838 P3H4Q92791 437 aa24.09■■□□□ 1.45
TMEM260-202ENST00000538838 MUC3BQ9H195 1237 aa24.09■■□□□ 1.45
TMEM260-202ENST00000538838 KIAA1522Q9P206 1035 aaPredicted RBP24.09■■□□□ 1.45
TMEM260-202ENST00000538838 PIAS3Q9Y6X2 628 aa24.09■■□□□ 1.45
TMEM260-202ENST00000538838 CISD3P0C7P0 127 aa24.08■■□□□ 1.45
TMEM260-202ENST00000538838 OTUD4Q01804 1114 aaKnown RBP24.08■■□□□ 1.45
TMEM260-202ENST00000538838 DNTTIP2Q5QJE6 756 aaKnown RBP24.08■■□□□ 1.45
TMEM260-202ENST00000538838 ZNF557Q8N988 423 aaPredicted RBP24.08■■□□□ 1.45
TMEM260-202ENST00000538838 ACTL9Q8TC94 416 aa24.08■■□□□ 1.45
TMEM260-202ENST00000538838 LRRN4Q8WUT4 740 aa24.08■■□□□ 1.45
TMEM260-202ENST00000538838 ARHGEF2Q92974 986 aaKnown RBP24.08■■□□□ 1.45
TMEM260-202ENST00000538838 NECAB3Q96P71 396 aaPredicted RBP24.08■■□□□ 1.45
TMEM260-202ENST00000538838 GGA2Q9UJY4 613 aa24.08■■□□□ 1.45
TMEM260-202ENST00000538838 SPECC1L-ADORA2AF8WAN1 911 aa24.07■■□□□ 1.44
TMEM260-202ENST00000538838 PABPC1P11940 636 aaKnown RBP24.07■■□□□ 1.44
TMEM260-202ENST00000538838 CTHP32929 405 aa24.07■■□□□ 1.44
TMEM260-202ENST00000538838 YBEYP58557 167 aaPredicted RBP24.07■■□□□ 1.44
TMEM260-202ENST00000538838 NOMO1Q15155 1222 aa24.07■■□□□ 1.44
TMEM260-202ENST00000538838 PARP15Q460N3 678 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms