RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 CA4P22748 312 aa20.89■□□□□ 0.93
DDX55-205ENST00000538744 MGAT1P26572 445 aa20.89■□□□□ 0.93
DDX55-205ENST00000538744 OR1D2P34982 312 aa20.89■□□□□ 0.93
DDX55-205ENST00000538744 PRPSAP1Q14558 356 aa20.89■□□□□ 0.93
DDX55-205ENST00000538744 MICALCLQ6ZW33 695 aa20.89■□□□□ 0.93
DDX55-205ENST00000538744 CYS1Q717R9 158 aa20.89■□□□□ 0.93
DDX55-205ENST00000538744 ALKBH8Q96BT7 664 aaKnown RBP20.89■□□□□ 0.93
DDX55-205ENST00000538744 BTN2A3PQ96KV6 586 aa20.89■□□□□ 0.93
DDX55-205ENST00000538744 SLC39A8Q9C0K1 460 aa20.89■□□□□ 0.93
DDX55-205ENST00000538744 GGA2Q9UJY4 613 aa20.89■□□□□ 0.93
DDX55-205ENST00000538744 DOCK4Q8N1I0 1966 aa20.89■□□□□ 0.93
DDX55-205ENST00000538744 ABHD14A-ACY1A0A1B0GW23 586 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 FAM159BA6NKW6 160 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 TYROBPO43914 113 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 MT-ND3P03897 115 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 PGAM1P18669 254 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 TUFMP49411 452 aaKnown RBP20.88■□□□□ 0.93
DDX55-205ENST00000538744 IL9RQ01113 521 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 SPARCL1Q14515 664 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 MS4A13Q5J8X5 152 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 SPOUT1Q5T280 376 aaKnown RBP20.88■□□□□ 0.93
DDX55-205ENST00000538744 GKAP1Q5VSY0 366 aaPredicted RBP20.88■□□□□ 0.93
DDX55-205ENST00000538744 TTC39BQ5VTQ0 682 aaPredicted RBP20.88■□□□□ 0.93
DDX55-205ENST00000538744 AFMIDQ63HM1 303 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 KCTD11Q693B1 232 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 MIB1Q86YT6 1006 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 LRRC49Q8IUZ0 686 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 ZSCAN18Q8TBC5 510 aaPredicted RBP20.88■□□□□ 0.93
DDX55-205ENST00000538744 DENND1AQ8TEH3 1009 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 TOP1MTQ969P6 601 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 MAGEB18Q96M61 343 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 UBE2OQ9C0C9 1292 aaKnown RBP20.88■□□□□ 0.93
DDX55-205ENST00000538744 DONSONQ9NYP3 566 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 MPP6Q9NZW5 540 aa20.88■□□□□ 0.93
DDX55-205ENST00000538744 CXorf49A8MYA2 514 aaPredicted RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 TBX18O95935 607 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 IGLV3-27P01718 113 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 CCNB1P14635 433 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 RPL17P18621 184 aaKnown RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 RING1Q06587 406 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 ACBD5Q5T8D3 534 aaPredicted RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 LGSNQ5TDP6 509 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 TIGD7Q6NT04 549 aaPredicted RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 ARHGAP36Q6ZRI8 547 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 ZNF683Q8IZ20 524 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 ANKLE1Q8NAG6 615 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 ZNF558Q96NG5 402 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 CDK5RAP1Q96SZ6 601 aaKnown RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 TRIM56Q9BRZ2 755 aaKnown RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 ZYG11BQ9C0D3 744 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 PRDM5Q9NQX1 630 aaPredicted RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 PPARGC1AQ9UBK2 798 aaKnown RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 PRDM4Q9UKN5 801 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 VANGL2Q9ULK5 521 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 MAGED2Q9UNF1 606 aaPredicted RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 SLC12A8A0AV02 714 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 PSMD3O43242 534 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 MAFKO60675 156 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 KRT37O76014 449 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 ZWINTO95229 277 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 RHOQP17081 205 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 RPA3P35244 121 aaPredicted RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 KPNA1P52294 538 aaPredicted RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 WDR4P57081 412 aaKnown RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 CRADDP78560 199 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 MTA1Q13330 715 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 TRMT10BQ6PF06 316 aaKnown RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 CACNA2D3Q8IZS8 1091 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 ARNTL2Q8WYA1 636 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 SEC16BQ96JE7 1060 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 MLPHQ9BV36 600 aaPredicted RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 LRRC40Q9H9A6 602 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 CASS4Q9NQ75 786 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 SMYD2Q9NRG4 433 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 NDFIP2Q9NV92 336 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 PIH1D1Q9NWS0 290 aaKnown RBP20.87■□□□□ 0.93
DDX55-205ENST00000538744 SYBUQ9NX95 663 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 MOCS1Q9NZB8 636 aa20.87■□□□□ 0.93
DDX55-205ENST00000538744 TCP11X1B4DZS4 312 aa20.86■□□□□ 0.93
DDX55-205ENST00000538744 MATN3O15232 486 aa20.86■□□□□ 0.93
DDX55-205ENST00000538744 TLR5O60602 858 aa20.86■□□□□ 0.93
DDX55-205ENST00000538744 ALDH1A2O94788 518 aa20.86■□□□□ 0.93
DDX55-205ENST00000538744 ASMTLO95671 621 aa20.86■□□□□ 0.93
DDX55-205ENST00000538744 SOD2P04179 222 aa20.86■□□□□ 0.93
DDX55-205ENST00000538744 OR52K1Q8NGK4 314 aa20.86■□□□□ 0.93
DDX55-205ENST00000538744 USP33Q8TEY7 942 aa20.86■□□□□ 0.93
DDX55-205ENST00000538744 TTC17Q96AE7 1141 aa20.86■□□□□ 0.93
DDX55-205ENST00000538744 ZNF689Q96CS4 500 aaPredicted RBP20.86■□□□□ 0.93
DDX55-205ENST00000538744 TGS1Q96RS0 853 aaKnown RBP20.86■□□□□ 0.93
DDX55-205ENST00000538744 IL12RB2Q99665 862 aa20.86■□□□□ 0.93
DDX55-205ENST00000538744 C11orf49Q9H6J7 331 aa20.86■□□□□ 0.93
DDX55-205ENST00000538744 CCSER2Q9H7U1 834 aa20.86■□□□□ 0.93
DDX55-205ENST00000538744 SAMD15Q9P1V8 674 aa20.86■□□□□ 0.93
DDX55-205ENST00000538744 AFF4Q9UHB7 1163 aaKnown RBP20.86■□□□□ 0.93
DDX55-205ENST00000538744 IGLV3-10A0A075B6K4 115 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 C2CD2LO14523 706 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 SNRPAP09012 282 aaKnown RBP20.85■□□□□ 0.93
DDX55-205ENST00000538744 CSH1P0DML2 217 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 CSH2P0DML3 217 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 CRYMQ14894 314 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms