RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 FAAP100Q0VG06 881 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 TAF5Q15542 800 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 HLFQ16534 295 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 TMC7Q7Z402 723 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 PSMA8Q8TAA3 256 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 FICDQ9BVA6 458 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 PNPLA8Q9NP80 782 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 ABCB10Q9NRK6 738 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 FAM49BQ9NUQ9 324 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 MORF4L1Q9UBU8 362 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 PIN4Q9Y237 131 aaKnown RBP7.04□□□□□ -1.28
SORT1-209ENST00000538502 ERGIC3Q9Y282 383 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 RAP2CQ9Y3L5 183 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 TRMUO75648 421 aaKnown RBP7.04□□□□□ -1.28
SORT1-209ENST00000538502 ASMTLO95671 621 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 MLYCDO95822 493 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 ERBB2P04626 1255 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 CYP1A2P05177 515 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 PAEPP09466 180 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 CDC16Q13042 620 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 MFSD5Q6N075 450 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 HHIPL2Q6UWX4 724 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 RAB43Q86YS6 212 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 SLC7A5P2Q9GIP4 190 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 DNAJC18Q9H819 358 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 XPNPEP3Q9NQH7 507 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 SNX7Q9UNH6 387 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 PTGES3LE9PB15 166 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 DYRK3O43781 588 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 ECE2O60344 883 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 EGFRP00533 1210 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 VCLP18206 1134 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 OGNP20774 298 aaKnown RBP7.04□□□□□ -1.28
SORT1-209ENST00000538502 RRM1P23921 792 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 GRK3P35626 688 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 GUCA1AP43080 201 aaPredicted RBP7.04□□□□□ -1.28
SORT1-209ENST00000538502 GLRBP48167 497 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 TOB1P50616 345 aaPredicted RBP7.04□□□□□ -1.28
SORT1-209ENST00000538502 RPS6KA3P51812 740 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 CSNK2BP67870 215 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 GPSM2P81274 684 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 HSF2Q03933 536 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 TWF1Q12792 350 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 TDRD10Q5VZ19 366 aaKnown RBP7.04□□□□□ -1.28
SORT1-209ENST00000538502 TUBA3EQ6PEY2 450 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 ZNF438Q7Z4V0 828 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 SIX5Q8N196 739 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 LRRN4CLQ8ND94 238 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 CHST13Q8NET6 341 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 SPPL2AQ8TCT8 520 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 TMEM143Q96AN5 459 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 SPATA5L1Q9BVQ7 753 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 MID1IP1Q9NPA3 183 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 DNAJC28Q9NX36 388 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 MAGEL2Q9UJ55 1249 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 ZNF222Q9UK12 451 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 NPHP4O75161 1426 aaPredicted RBP7.04□□□□□ -1.28
SORT1-209ENST00000538502 PTPRUQ92729 1446 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 TEX28O15482 410 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 UMPSP11172 480 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 RCVRNP35243 200 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 HNMTP50135 292 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 PSMD5Q16401 504 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 MPZL3Q6UWV2 235 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 ZNF720Q7Z2F6 126 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 STK40Q8N2I9 435 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 PQLC1Q8N2U9 271 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 HM13Q8TCT9 377 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 HTR3CQ8WXA8 447 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 TMEM176AQ96HP8 235 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 MBOAT7Q96N66 472 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 RPRD1AQ96P16 312 aaPredicted RBP7.04□□□□□ -1.28
SORT1-209ENST00000538502 TUBGCP5Q96RT8 1024 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 RUSC1Q9BVN2 902 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 ROGDIQ9GZN7 287 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 SEMA6AQ9H2E6 1030 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 CYP4F12Q9HCS2 524 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 TAS2R13Q9NYV9 303 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 ARMCX1Q9P291 453 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 PADI4Q9UM07 663 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 SLC28A1O00337 649 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 POLRMTO00411 1230 aaKnown RBP7.04□□□□□ -1.28
SORT1-209ENST00000538502 S100A6P06703 90 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 ITGA4P13612 1032 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 SP100P23497 879 aaPredicted RBP7.04□□□□□ -1.28
SORT1-209ENST00000538502 MYL9P24844 172 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 SREBF1P36956 1147 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 CDK9P50750 372 aaKnown RBP7.04□□□□□ -1.28
SORT1-209ENST00000538502 NME5P56597 212 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 TUBA1BP68363 451 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 BST2Q10589 180 aaKnown RBP7.04□□□□□ -1.28
SORT1-209ENST00000538502 TMEM119Q4V9L6 283 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 DUPD1Q68J44 220 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 TUBA1AQ71U36 451 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 NT5DC4Q86YG4 428 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 ANKRD13AQ8IZ07 590 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 ACTL9Q8TC94 416 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 MAGEE2Q8TD90 523 aaPredicted RBP7.04□□□□□ -1.28
SORT1-209ENST00000538502 KLHL32Q96NJ5 620 aa7.04□□□□□ -1.28
SORT1-209ENST00000538502 TBL1YQ9BQ87 522 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms