RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TKTP29401 623 aaKnown RBP17.11■□□□□ 0.33
SCARB1-205ENST00000538291 CTNNB1P35222 781 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 MAPK8P45983 427 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 SP3Q02447 781 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 ACSM2AQ08AH3 577 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 ACSM2BQ68CK6 577 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 COLGALT2Q8IYK4 626 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 WDR36Q8NI36 951 aaKnown RBP17.11■□□□□ 0.33
SCARB1-205ENST00000538291 CROTQ9UKG9 612 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 NUDT5Q9UKK9 219 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 DUSP12Q9UNI6 340 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 CCDC103Q8IW40 242 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 RNFT2Q96EX2 444 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 FAM126AQ9BYI3 521 aaPredicted RBP17.11■□□□□ 0.33
SCARB1-205ENST00000538291 ZMYM5Q9UJ78 669 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 ZNF112Q9UJU3 913 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 AK9Q5TCS8 1911 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 ADGRA3Q8IWK6 1321 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 ANKDD1BA6NHY2 528 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 A8MX80 341 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 FASP25445 335 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 CHKAP35790 457 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 KRR1Q13601 381 aaKnown RBP17.11■□□□□ 0.33
SCARB1-205ENST00000538291 PCBP1Q15365 356 aaKnown RBP eCLIP17.11■□□□□ 0.331e-8■■■□□ 14.9
SCARB1-205ENST00000538291 WSCD1Q658N2 575 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 WDR59Q6PJI9 974 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 TRAF7Q6Q0C0 670 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 PIH1D1Q9NWS0 290 aaKnown RBP17.11■□□□□ 0.33
SCARB1-205ENST00000538291 CCDC154A6NI56 674 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 SMIM22K7EJ46 135 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 APOC4-APOC2K7ER74 178 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 APOC2P02655 101 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 AMD1P17707 334 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 HDCP19113 662 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 FIBCD1Q8N539 461 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 CDHR5Q9HBB8 845 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 CATSPERZQ9NTU4 200 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 C1QTNF3-AMACRE9PGA6 284 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 DLGAP3O95886 979 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 HSMCR30P0CW71 290 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 PAICSP22234 425 aaKnown RBP17.1■□□□□ 0.33
SCARB1-205ENST00000538291 OLFML2BQ68BL8 750 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 SLC30A9Q6PML9 568 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 COMMD2Q86X83 199 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 TMEM132CQ8N3T6 1108 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 LRRC4BQ9NT99 713 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 GNRH1P01148 92 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 PAX3P23760 479 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 PSEN1P49768 467 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 IL2P60568 153 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 IL5RAQ01344 420 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 HDDC2Q7Z4H3 204 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 GPSM1Q86YR5 675 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 EPHX4Q8IUS5 362 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 ANKRD7Q92527 254 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 SAC3D1A6NKF1 404 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 H0YC42 278 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 EML1O00423 815 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 OR6A2O95222 327 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 PURAQ00577 322 aaKnown RBP17.1■□□□□ 0.33
SCARB1-205ENST00000538291 RRP1BQ14684 758 aaKnown RBP17.1■□□□□ 0.33
SCARB1-205ENST00000538291 CBWD6Q4V339 395 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 NEK10Q6ZWH5 1172 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 TNPO3Q9Y5L0 923 aaKnown RBP17.1■□□□□ 0.33
SCARB1-205ENST00000538291 CES2O00748 559 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 FKBP6O75344 327 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 CSH1P0DML2 217 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 CSH2P0DML3 217 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 UQCRBP14927 111 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 PECAM1P16284 738 aaPredicted RBP17.1■□□□□ 0.33
SCARB1-205ENST00000538291 IFNGR2P38484 337 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 CLK2P49760 499 aaKnown RBP17.1■□□□□ 0.33
SCARB1-205ENST00000538291 FASTKQ14296 549 aaKnown RBP17.1■□□□□ 0.33
SCARB1-205ENST00000538291 PARP6Q2NL67 630 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 KIAA1324Q6UXG2 1013 aaKnown RBP17.1■□□□□ 0.33
SCARB1-205ENST00000538291 SYT12Q8IV01 421 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 ELMO3Q96BJ8 720 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 APOPT1Q96IL0 206 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 DNAJC1Q96KC8 554 aaKnown RBP17.1■□□□□ 0.33
SCARB1-205ENST00000538291 SEPHS2Q99611 448 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 THAP1Q9NVV9 213 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 OR12D3Q9UGF7 316 aa17.1■□□□□ 0.33
SCARB1-205ENST00000538291 A0A087X1B8 175 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 HS6ST1O60243 411 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 ATG7O95352 703 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 CDK7P50613 346 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 SPIDRQ14159 915 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 DEFB115Q30KQ5 88 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 DEFB107AQ8IZN7 70 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 GRIN3AQ8TCU5 1115 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 UBE2E3Q969T4 207 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 C18orf25Q96B23 403 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-205ENST00000538291 SEMA4AQ9H3S1 761 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 ATP6V1HQ9UI12 483 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 CDH9Q9ULB4 789 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 TNFSF13BQ9Y275 285 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 ANKRD63C9JTQ0 380 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 E7ENQ6 273 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 ADH1AP07327 375 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 SMIM10L2AP0DMW4 78 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms