RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 IFT81Q8WYA0 676 aa12.67□□□□□ -0.38
DDB1-209ENST00000537877 ING5Q8WYH8 240 aa12.67□□□□□ -0.38
DDB1-209ENST00000537877 USP13Q92995 863 aaPredicted RBP12.67□□□□□ -0.38
DDB1-209ENST00000537877 CELF6Q96J87 481 aaKnown RBP12.67□□□□□ -0.38
DDB1-209ENST00000537877 LGMNQ99538 433 aa12.67□□□□□ -0.38
DDB1-209ENST00000537877 C10orf88Q9H8K7 445 aa12.67□□□□□ -0.38
DDB1-209ENST00000537877 NDFIP2Q9NV92 336 aa12.67□□□□□ -0.38
DDB1-209ENST00000537877 GRHL1Q9NZI5 618 aa12.67□□□□□ -0.38
DDB1-209ENST00000537877 SNX24Q9Y343 169 aa12.67□□□□□ -0.38
DDB1-209ENST00000537877 ZFP37Q9Y6Q3 630 aaPredicted RBP12.67□□□□□ -0.38
DDB1-209ENST00000537877 DOCK6Q96HP0 2047 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 A0A0A0MRY4 1105 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 ARHGAP42A6NI28 874 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 DFFAO00273 331 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 DNALI1O14645 258 aaPredicted RBP12.66□□□□□ -0.38
DDB1-209ENST00000537877 RAMP2O60895 175 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 PRAMEF12O95522 483 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 MYBL2P10244 700 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 CCNCP24863 283 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 OR1E1P30953 314 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 RPL22P35268 128 aaKnown RBP12.66□□□□□ -0.38
DDB1-209ENST00000537877 VPS41P49754 854 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 GPS1Q13098 491 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 EMBQ6PCB8 327 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 SETD3Q86TU7 594 aaPredicted RBP12.66□□□□□ -0.38
DDB1-209ENST00000537877 CIR1Q86X95 450 aaPredicted RBP12.66□□□□□ -0.38
DDB1-209ENST00000537877 TP53INP2Q8IXH6 220 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 CCDC13Q8IYE1 715 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 CCDC33Q8N5R6 958 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 ITFG1Q8TB96 612 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 FATE1Q969F0 183 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 OTUB2Q96DC9 234 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 MYEOVQ96EZ4 313 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 P2RY11Q96G91 374 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 SPATA13Q96N96 652 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 VAT1Q99536 393 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 HINFPQ9BQA5 517 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 SLC39A8Q9C0K1 460 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 MAGEH1Q9H213 219 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 TTYH1Q9H313 450 aaPredicted RBP12.66□□□□□ -0.38
DDB1-209ENST00000537877 NOL6Q9H6R4 1146 aaKnown RBP12.66□□□□□ -0.38
DDB1-209ENST00000537877 CHD7Q9P2D1 2997 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 TBC1D14Q9P2M4 693 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 NFU1Q9UMS0 254 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 CCL26Q9Y258 94 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 MTCH2Q9Y6C9 303 aa12.66□□□□□ -0.38
DDB1-209ENST00000537877 NYNRINQ9P2P1 1898 aaKnown RBP12.66□□□□□ -0.38
DDB1-209ENST00000537877 RASA4BC9J798 803 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 SMAPO00193 183 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 RNF103O00237 685 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 RASA4O43374 803 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 OPHN1O60890 802 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 ZSCAN5DPP0CG00 497 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 ETS1P14921 441 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 ECHS1P30084 290 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 ETFBP38117 255 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 CLCN6P51797 869 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 RPS24P62847 133 aaKnown RBP12.65□□□□□ -0.38
DDB1-209ENST00000537877 TRADDQ15628 312 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 CTC1Q2NKJ3 1217 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 ANO4Q32M45 955 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 MPPE1Q53F39 396 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 MPP7Q5T2T1 576 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 C6orf118Q5T5N4 469 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 IZUMO3Q5VZ72 239 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 ZDHHC24Q6UX98 284 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 ZNF783Q6ZMS7 281 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 B4GALNT4Q76KP1 1039 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 PCGF5Q86SE9 256 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 ARID3BQ8IVW6 561 aaPredicted RBP12.65□□□□□ -0.38
DDB1-209ENST00000537877 BBS7Q8IWZ6 715 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 NPAS3Q8IXF0 933 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 CFAP52Q8N1V2 620 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 CELF5Q8N6W0 485 aaKnown RBP12.65□□□□□ -0.38
DDB1-209ENST00000537877 TDRD5Q8NAT2 981 aaKnown RBP12.65□□□□□ -0.38
DDB1-209ENST00000537877 NETO2Q8NC67 525 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 ZSCAN18Q8TBC5 510 aaPredicted RBP12.65□□□□□ -0.38
DDB1-209ENST00000537877 AENQ8WTP8 325 aaKnown RBP12.65□□□□□ -0.38
DDB1-209ENST00000537877 ART4Q93070 314 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 FMO2Q99518 471 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 SMG9Q9H0W8 520 aaKnown RBP12.65□□□□□ -0.38
DDB1-209ENST00000537877 ADAM7Q9H2U9 754 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 ARFGAP3Q9NP61 516 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 ZDHHC18Q9NUE0 388 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 GDE1Q9NZC3 331 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 MTRF1LQ9UGC7 380 aaKnown RBP12.65□□□□□ -0.38
DDB1-209ENST00000537877 SHOC2Q9UQ13 582 aa12.65□□□□□ -0.38
DDB1-209ENST00000537877 COLQQ9Y215 455 aaPredicted RBP12.65□□□□□ -0.38
DDB1-209ENST00000537877 CHD5Q8TDI0 1954 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.64□□□□□ -0.39
DDB1-209ENST00000537877 ILVBLA1L0T0 632 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 TRDMT1O14717 391 aaKnown RBP12.64□□□□□ -0.39
DDB1-209ENST00000537877 SLC9A3R1O14745 358 aaPredicted RBP12.64□□□□□ -0.39
DDB1-209ENST00000537877 TSPAN3O60637 253 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 MAFKO60675 156 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 TBL1XO60907 577 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 CYBBP04839 570 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 PAPOLAP51003 745 aaKnown RBP12.64□□□□□ -0.39
DDB1-209ENST00000537877 SGSHP51688 502 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 PLTPP55058 493 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms