RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 CCNI2Q6ZMN8 369 aaPredicted RBP9.99□□□□□ -0.81
CHD4-207ENST00000537634 DBX2Q6ZNG2 339 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 SND1Q7KZF4 910 aaKnown RBP eCLIP9.99□□□□□ -0.81
CHD4-207ENST00000537634 CIR1Q86X95 450 aaPredicted RBP9.99□□□□□ -0.81
CHD4-207ENST00000537634 DEFB106AQ8N104 65 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 CCAR2Q8N163 923 aaKnown RBP9.99□□□□□ -0.81
CHD4-207ENST00000537634 STK40Q8N2I9 435 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 C1orf131Q8NDD1 294 aaKnown RBP9.99□□□□□ -0.81
CHD4-207ENST00000537634 SLC6A18Q96N87 628 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 RPRD1AQ96P16 312 aaPredicted RBP9.99□□□□□ -0.81
CHD4-207ENST00000537634 SLC2A13Q96QE2 648 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 PPP1R9BQ96SB3 815 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 PRMT1Q99873 361 aaKnown RBP9.99□□□□□ -0.81
CHD4-207ENST00000537634 ORAI3Q9BRQ5 295 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 NEUROG2Q9H2A3 272 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 SYNCQ9H7C4 482 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 AASDHPPTQ9NRN7 309 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 ASNSD1Q9NWL6 643 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 TPX2Q9ULW0 747 aaKnown RBP9.99□□□□□ -0.81
CHD4-207ENST00000537634 PCDHGC3Q9UN70 934 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 BTBD3Q9Y2F9 522 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 CABIN1Q9Y6J0 2220 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 KNL1Q8NG31 2342 aa9.99□□□□□ -0.81
CHD4-207ENST00000537634 CHD6Q8TD26 2715 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 KCNK3O14649 394 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 VILLO15195 856 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 TNFSF14O43557 240 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 DAB1O75553 588 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 IL1BP01584 269 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 GOT1P17174 413 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 MZF1P28698 734 aaPredicted RBP9.98□□□□□ -0.81
CHD4-207ENST00000537634 KRT9P35527 623 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 NUMBP49757 651 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 CCR5P51681 352 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 ADPRHP54922 357 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 UBE2HP62256 183 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 IL9RQ01113 521 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 CENPCQ03188 943 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 SCAPQ12770 1279 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 NME3Q13232 169 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 EIF4EBP2Q13542 120 aaPredicted RBP9.98□□□□□ -0.81
CHD4-207ENST00000537634 KCNT1Q5JUK3 1230 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 OR6B2Q6IFH4 312 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 FBXL22Q6P050 247 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 C11orf57Q6ZUT1 292 aaPredicted RBP9.98□□□□□ -0.81
CHD4-207ENST00000537634 FAM183BPQ6ZVS7 135 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 DSG4Q86SJ6 1040 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 PROSER1Q86XN7 944 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 WDTC1Q8N5D0 677 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 AADATQ8N5Z0 425 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 OR14C36Q8NHC7 312 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 PTPRN2Q92932 1015 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 SPAG5Q96R06 1193 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 FAM129BQ96TA1 746 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 CCDC86Q9H6F5 360 aaKnown RBP9.98□□□□□ -0.81
CHD4-207ENST00000537634 TOR4AQ9NXH8 423 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 FTSJ1Q9UET6 329 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 SLC25A13Q9UJS0 675 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 AKAP13Q12802 2813 aa9.98□□□□□ -0.81
CHD4-207ENST00000537634 PLXNB3Q9ULL4 1909 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.97□□□□□ -0.81
CHD4-207ENST00000537634 A0A1B0GTQ1 180 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 ERBB2P04626 1255 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 ATXN8OSP0DMR3 200 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 VAV1P15498 845 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 PON1P27169 355 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 CD38P28907 300 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 PLK1P53350 603 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 ZNF177Q13360 481 aaPredicted RBP9.97□□□□□ -0.81
CHD4-207ENST00000537634 AUHQ13825 339 aaKnown RBP9.97□□□□□ -0.81
CHD4-207ENST00000537634 KCNJ12Q14500 433 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 MAN2A1Q16706 1144 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 ACCSLQ4AC99 568 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 CCDC157Q569K6 752 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 SLC45A4Q5BKX6 768 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 SMYD5Q6GMV2 418 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 CXorf57Q6NSI4 855 aaKnown RBP9.97□□□□□ -0.81
CHD4-207ENST00000537634 OLFML1Q6UWY5 402 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 SLC26A9Q7LBE3 791 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 FAM114A1Q8IWE2 563 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 GALNT15Q8N3T1 639 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 MLKLQ8NB16 471 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 OR8D1Q8WZ84 308 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 SERAC1Q96JX3 654 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 ELF4Q99607 663 aaPredicted RBP9.97□□□□□ -0.81
CHD4-207ENST00000537634 GDF3Q9NR23 364 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 VPS28Q9UK41 221 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 DNAJC12Q9UKB3 198 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 VANGL2Q9ULK5 521 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 LHX6Q9UPM6 363 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 PKD1L2Q7Z442 2459 aa9.97□□□□□ -0.81
CHD4-207ENST00000537634 COL5A1P20908 1838 aaPredicted RBP9.96□□□□□ -0.81
CHD4-207ENST00000537634 TBC1D3DA0A087WVF3 549 aa9.96□□□□□ -0.82
CHD4-207ENST00000537634 TBC1D3IA0A087WXS9 549 aa9.96□□□□□ -0.82
CHD4-207ENST00000537634 TBC1D3EA0A087X179 549 aa9.96□□□□□ -0.82
CHD4-207ENST00000537634 TBC1D3KA0A087X1G2 549 aa9.96□□□□□ -0.82
CHD4-207ENST00000537634 TBC1D3FA6NER0 549 aaPredicted RBP9.96□□□□□ -0.82
CHD4-207ENST00000537634 TBC1D3LB9A6J9 549 aa9.96□□□□□ -0.82
CHD4-207ENST00000537634 C1QTNF3-AMACRE9PGA6 284 aa9.96□□□□□ -0.82
CHD4-207ENST00000537634 M0QYT0 321 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms