RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 CLK2P49760 499 aaKnown RBP12.5□□□□□ -0.41
CIT-208ENST00000537607 FKBP1BP68106 108 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 TBL3Q12788 808 aaKnown RBP12.5□□□□□ -0.41
CIT-208ENST00000537607 ACBD5Q5T8D3 534 aaPredicted RBP12.5□□□□□ -0.41
CIT-208ENST00000537607 CHADLQ6NUI6 762 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 OXNAD1Q96HP4 312 aaPredicted RBP12.5□□□□□ -0.41
CIT-208ENST00000537607 CNBD2Q96M20 576 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 ZNF670Q9BS34 389 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 EXOSC4Q9NPD3 245 aaKnown RBP12.5□□□□□ -0.41
CIT-208ENST00000537607 UXTQ9UBK9 157 aaPredicted RBP12.5□□□□□ -0.41
CIT-208ENST00000537607 BTN3A1O00481 513 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 CPSF4O95639 269 aaKnown RBP12.5□□□□□ -0.41
CIT-208ENST00000537607 IGSF6O95976 241 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 ITGAVP06756 1048 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 CD86P42081 329 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 RFX3P48380 749 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 PPM1LQ5SGD2 360 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 HECTD3Q5T447 861 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 ARMC12Q5T9G4 340 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 TRMT11Q7Z4G4 463 aaKnown RBP12.5□□□□□ -0.41
CIT-208ENST00000537607 FAM35AQ86V20 835 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 KYQ8NBH2 561 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 METTL6Q8TCB7 284 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 CPXM1Q96SM3 734 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 DYRK1BQ9Y463 629 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 SMIM28A0A1B0GU29 152 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 TPP1O14773 563 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 CCNB1P14635 433 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 NAGLUP54802 743 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 MRPS5P82675 430 aaKnown RBP12.5□□□□□ -0.41
CIT-208ENST00000537607 DDR2Q16832 855 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 SPDYCQ5MJ68 293 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 TTC33Q6PID6 262 aaPredicted RBP12.5□□□□□ -0.41
CIT-208ENST00000537607 SYTL1Q8IYJ3 562 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 TMEM159Q96B96 161 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 ZFP42Q96MM3 310 aa12.5□□□□□ -0.41
CIT-208ENST00000537607 DHX33Q9H6R0 707 aaKnown RBP12.5□□□□□ -0.41
CIT-208ENST00000537607 ANKRD26Q9UPS8 1709 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 KRT6AP02538 564 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 KRT6BP04259 564 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 PCNAP12004 261 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 ACADSP16219 412 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 MSH3P20585 1137 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 KRT6CP48668 564 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 MRPS35P82673 323 aaKnown RBP12.49□□□□□ -0.41
CIT-208ENST00000537607 ZCWPW2Q504Y3 356 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 C11orf74Q86VG3 221 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 CERS2Q96G23 380 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 TM6SF2Q9BZW4 377 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 RMND5AQ9H871 391 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 APPL1Q9UKG1 709 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 PIGNO95427 931 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 MMP3P08254 477 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 HDCP19113 662 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 MAPK1P28482 360 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 RPL9P32969 192 aaKnown RBP12.49□□□□□ -0.41
CIT-208ENST00000537607 NOGQ13253 232 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 PABPC1LQ4VXU2 614 aaKnown RBP12.49□□□□□ -0.41
CIT-208ENST00000537607 C9orf57Q5W0N0 161 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 ERAP2Q6P179 960 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 B4GALNT2Q8NHY0 566 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 ART4Q93070 314 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 GLTPD2A6NH11 291 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 STAU1O95793 577 aaKnown RBP12.49□□□□□ -0.41
CIT-208ENST00000537607 SKIV2L2P42285 1042 aaKnown RBP12.49□□□□□ -0.41
CIT-208ENST00000537607 DSG1Q02413 1049 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 PCID2Q5JVF3 399 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 LRRC8BQ6P9F7 803 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 KYAT3Q6YP21 454 aaKnown RBP12.49□□□□□ -0.41
CIT-208ENST00000537607 TMPRSS6Q8IU80 811 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 ZNF786Q8N393 782 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 GPR152Q8TDT2 470 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 ERLEC1Q96DZ1 483 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 PDZK1P1A8MUH7 402 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 RAD51BO15315 384 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 TREHO43280 583 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 CYP1A1P04798 512 aaPredicted RBP12.49□□□□□ -0.41
CIT-208ENST00000537607 FGFR1P11362 822 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 ELNP15502 786 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 TNFRSF8P28908 595 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 PWP1Q13610 501 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 UROC1Q96N76 676 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 ZNF558Q96NG5 402 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 C2orf49Q9BVC5 232 aaPredicted RBP12.49□□□□□ -0.41
CIT-208ENST00000537607 POLG2Q9UHN1 485 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 GIT1Q9Y2X7 761 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 PTCH2Q9Y6C5 1203 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 MON2Q7Z3U7 1717 aa12.49□□□□□ -0.41
CIT-208ENST00000537607 SMIM35A0A1B0GVV1 85 aa12.48□□□□□ -0.41
CIT-208ENST00000537607 ENO4A6NNW6 628 aa12.48□□□□□ -0.41
CIT-208ENST00000537607 MEI4A8MW99 385 aa12.48□□□□□ -0.41
CIT-208ENST00000537607 ALDH1A2O94788 518 aa12.48□□□□□ -0.41
CIT-208ENST00000537607 ERBB2P04626 1255 aa12.48□□□□□ -0.41
CIT-208ENST00000537607 PIRTP0C851 137 aa12.48□□□□□ -0.41
CIT-208ENST00000537607 ZCCHC18P0CG32 403 aa12.48□□□□□ -0.41
CIT-208ENST00000537607 FLT3P36888 993 aa12.48□□□□□ -0.41
CIT-208ENST00000537607 CDK7P50613 346 aa12.48□□□□□ -0.41
CIT-208ENST00000537607 MAXP61244 160 aa12.48□□□□□ -0.41
CIT-208ENST00000537607 TJAP1Q5JTD0 557 aa12.48□□□□□ -0.41
CIT-208ENST00000537607 SCARA3Q6AZY7 606 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms