RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 OR1G1P47890 313 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 NPY2RP49146 381 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 KCNJ2P63252 427 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 FAM189BP81408 668 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 PPP2R5DQ14738 602 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 NFE2Q16621 373 aaPredicted RBP16.02■□□□□ 0.15
MKS1-204ENST00000537529 SCD5Q86SK9 330 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 NUDCD3Q8IVD9 361 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 COLGALT2Q8IYK4 626 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 ATPAF2Q8N5M1 289 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.02■□□□□ 0.15
MKS1-204ENST00000537529 ATP2A3Q93084 1043 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 E2F7Q96AV8 911 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 ZNF669Q96BR6 464 aaPredicted RBP16.02■□□□□ 0.15
MKS1-204ENST00000537529 FAM193BQ96PV7 902 aaPredicted RBP16.02■□□□□ 0.15
MKS1-204ENST00000537529 CPNE1Q99829 537 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 ABI2Q9NYB9 513 aaPredicted RBP16.02■□□□□ 0.15
MKS1-204ENST00000537529 SIRPGQ9P1W8 387 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 SLC17A6Q9P2U8 582 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 ZFP69BQ9UJL9 534 aa16.02■□□□□ 0.15
MKS1-204ENST00000537529 MTO1Q9Y2Z2 717 aaKnown RBP16.02■□□□□ 0.15
MKS1-204ENST00000537529 MAGEB16A2A368 324 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 DFFAO00273 331 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 GLRA3O75311 464 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 USP1O94782 785 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 CCNCP24863 283 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 ARFIP2P53365 341 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 TMPRSS15P98073 1019 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 OLIG2Q13516 323 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 MBTPS1Q14703 1052 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 GRTP1Q5TC63 336 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 MANEALQ5VSG8 457 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 CASP10Q92851 521 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 FUBP3Q96I24 572 aaKnown RBP eCLIP16.01■□□□□ 0.15
MKS1-204ENST00000537529 C7orf26Q96N11 449 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 SERPINB11Q96P15 392 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 TBC1D13Q9NVG8 400 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 ADAM28Q9UKQ2 775 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 PTPRDP23468 1912 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 A0A0G2JND7 137 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 A0A1W2PQH9 124 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 TPP1O14773 563 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 MSI1O43347 362 aaKnown RBP16.01■□□□□ 0.15
MKS1-204ENST00000537529 AOC2O75106 756 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 BPGMP07738 259 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 ITGA2BP08514 1039 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 ERVK-10P10266 1014 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 DNAJB2P25686 324 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 PLEKHG4Q58EX7 1191 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 NAPEPLDQ6IQ20 393 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 CES3Q6UWW8 571 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 LINC00523Q86TU6 105 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 TMEM135Q86UB9 458 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 KIF2BQ8N4N8 673 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 DPF3Q92784 378 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 RAB3IPQ96QF0 476 aaPredicted RBP16.01■□□□□ 0.15
MKS1-204ENST00000537529 MECRQ9BV79 373 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 FTHL17Q9BXU8 183 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 IL22Q9GZX6 179 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 LRMDAQ9H2I8 198 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 SFMBT1Q9UHJ3 866 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 PRG3Q9Y2Y8 225 aaPredicted RBP16.01■□□□□ 0.15
MKS1-204ENST00000537529 PSAT1Q9Y617 370 aa16.01■□□□□ 0.15
MKS1-204ENST00000537529 FAM237BA0A1B0GVD1 139 aa16■□□□□ 0.15
MKS1-204ENST00000537529 ALDOAP04075 364 aaKnown RBP16■□□□□ 0.15
MKS1-204ENST00000537529 PDE1BQ01064 536 aa16■□□□□ 0.15
MKS1-204ENST00000537529 RIPK1Q13546 671 aa16■□□□□ 0.15
MKS1-204ENST00000537529 CHI3L2Q15782 390 aa16■□□□□ 0.15
MKS1-204ENST00000537529 ARHGAP12Q8IWW6 846 aa16■□□□□ 0.15
MKS1-204ENST00000537529 REM2Q8IYK8 340 aaPredicted RBP16■□□□□ 0.15
MKS1-204ENST00000537529 ARHGAP18Q8N392 663 aa16■□□□□ 0.15
MKS1-204ENST00000537529 RAET1EQ8TD07 263 aa16■□□□□ 0.15
MKS1-204ENST00000537529 FCRL2Q96LA5 508 aaPredicted RBP16■□□□□ 0.15
MKS1-204ENST00000537529 C8orf48Q96LL4 319 aa16■□□□□ 0.15
MKS1-204ENST00000537529 FCRL3Q96P31 734 aaPredicted RBP16■□□□□ 0.15
MKS1-204ENST00000537529 TMEM120AQ9BXJ8 343 aa16■□□□□ 0.15
MKS1-204ENST00000537529 SAR1AQ9NR31 198 aa16■□□□□ 0.15
MKS1-204ENST00000537529 SCML2Q9UQR0 700 aa16■□□□□ 0.15
MKS1-204ENST00000537529 CCDC195A0A1B0GUA6 201 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 A0A1W2PQ45 241 aaPredicted RBP15.99■□□□□ 0.15
MKS1-204ENST00000537529 A0A1W2PQY0 241 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 SYN3O14994 580 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 TADA2AO75478 443 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 ATP6V1G2O95670 118 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 COL6A1P12109 1028 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 RASSF2P50749 326 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 NRG1Q02297 640 aaPredicted RBP15.99■□□□□ 0.15
MKS1-204ENST00000537529 BST1Q10588 318 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 CDH17Q12864 832 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 ANKRD20A4Q4UJ75 823 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 TAF1BQ53T94 588 aaPredicted RBP15.99■□□□□ 0.15
MKS1-204ENST00000537529 MTDHQ86UE4 582 aaKnown RBP15.99■□□□□ 0.15
MKS1-204ENST00000537529 KLHDC8BQ8IXV7 354 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 SLC43A3Q8NBI5 491 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 CD99L2Q8TCZ2 262 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 INPP5DQ92835 1189 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 PPP1R2P1Q96PQ5 205 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 FBXO44Q9H4M3 255 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 NMUR1Q9HB89 426 aa15.99■□□□□ 0.15
MKS1-204ENST00000537529 DCDC2Q9UHG0 476 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms