RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 NDUFAF2Q8N183 169 aa9.53□□□□□ -0.88
UBE3B-207ENST00000537063 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.53□□□□□ -0.88
UBE3B-207ENST00000537063 OR52K1Q8NGK4 314 aa9.53□□□□□ -0.88
UBE3B-207ENST00000537063 SCAMP5Q8TAC9 235 aa9.53□□□□□ -0.88
UBE3B-207ENST00000537063 CPNE1Q99829 537 aa9.53□□□□□ -0.88
UBE3B-207ENST00000537063 ALG13Q9NP73 1137 aaKnown RBP9.53□□□□□ -0.88
UBE3B-207ENST00000537063 SLC17A6Q9P2U8 582 aa9.53□□□□□ -0.88
UBE3B-207ENST00000537063 VANGL2Q9ULK5 521 aa9.53□□□□□ -0.88
UBE3B-207ENST00000537063 DNAH12Q6ZR08 3092 aa9.53□□□□□ -0.88
UBE3B-207ENST00000537063 DOCK4Q8N1I0 1966 aa9.53□□□□□ -0.88
UBE3B-207ENST00000537063 ITGA2BP08514 1039 aa9.52□□□□□ -0.88
UBE3B-207ENST00000537063 CKBP12277 381 aa9.52□□□□□ -0.88
UBE3B-207ENST00000537063 DNAJB2P25686 324 aa9.52□□□□□ -0.88
UBE3B-207ENST00000537063 EPHB2P29323 1055 aa9.52□□□□□ -0.88
UBE3B-207ENST00000537063 ACLYP53396 1101 aa9.52□□□□□ -0.88
UBE3B-207ENST00000537063 OVGP1Q12889 678 aa9.52□□□□□ -0.88
UBE3B-207ENST00000537063 ATG16L1Q676U5 607 aa9.52□□□□□ -0.88
UBE3B-207ENST00000537063 MSANTD2Q6P1R3 559 aa9.52□□□□□ -0.88
UBE3B-207ENST00000537063 COLGALT2Q8IYK4 626 aa9.52□□□□□ -0.88
UBE3B-207ENST00000537063 ARMC2Q8NEN0 867 aa9.52□□□□□ -0.88
UBE3B-207ENST00000537063 HASPINQ8TF76 798 aa9.52□□□□□ -0.88
UBE3B-207ENST00000537063 KCNU1A8MYU2 1149 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 GLRA3O75311 464 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 WFS1O76024 890 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 NFKB1P19838 968 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 CCNCP24863 283 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 NPY2RP49146 381 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 BST1Q10588 318 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 PDE1CQ14123 709 aaPredicted RBP9.52□□□□□ -0.89
UBE3B-207ENST00000537063 GRTP1Q5TC63 336 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 CASC4Q6P4E1 433 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 RASSF3Q86WH2 238 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 PTCD3Q96EY7 689 aaKnown RBP9.52□□□□□ -0.89
UBE3B-207ENST00000537063 IL12RB2Q99665 862 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 MECRQ9BV79 373 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 TMEM120AQ9BXJ8 343 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 NOD2Q9HC29 1040 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 RNF186Q9NXI6 227 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 FNIP2Q9P278 1114 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 ZFP69BQ9UJL9 534 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 INPP5FQ9Y2H2 1132 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 MAGEB16A2A368 324 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 WASH4PA8MWX3 477 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 AP3B1O00203 1094 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 TPP1O14773 563 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 PSMD3O43242 534 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 DDHD2O94830 711 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 ELNP15502 786 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 GP5P40197 560 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 YWHAHQ04917 246 aaPredicted RBP9.52□□□□□ -0.89
UBE3B-207ENST00000537063 OLIG2Q13516 323 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 HSF5Q4G112 596 aaPredicted RBP9.52□□□□□ -0.89
UBE3B-207ENST00000537063 TAF1BQ53T94 588 aaPredicted RBP9.52□□□□□ -0.89
UBE3B-207ENST00000537063 ICE2Q659A1 982 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 MBLAC2Q68D91 279 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 CCDC117Q8IWD4 279 aaPredicted RBP9.52□□□□□ -0.89
UBE3B-207ENST00000537063 KIF2BQ8N4N8 673 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 E2F7Q96AV8 911 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 FUBP3Q96I24 572 aaKnown RBP eCLIP9.52□□□□□ -0.89
UBE3B-207ENST00000537063 RBBP8Q99708 897 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 CFHR5Q9BXR6 569 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 PIH1D1Q9NWS0 290 aaKnown RBP9.52□□□□□ -0.89
UBE3B-207ENST00000537063 KCNK4Q9NYG8 393 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 IL37Q9NZH6 218 aa9.52□□□□□ -0.89
UBE3B-207ENST00000537063 MOXD2PA6NHM9 499 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 PGFP49763 221 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 SLC24A5Q71RS6 500 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 MTDHQ86UE4 582 aaKnown RBP9.51□□□□□ -0.89
UBE3B-207ENST00000537063 SPATA2LQ8IUW3 424 aaPredicted RBP9.51□□□□□ -0.89
UBE3B-207ENST00000537063 LZTR1Q8N653 840 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 CNTD1Q8N815 330 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.51□□□□□ -0.89
UBE3B-207ENST00000537063 CASP10Q92851 521 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 FATE1Q969F0 183 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 ZNF419Q96HQ0 510 aaPredicted RBP9.51□□□□□ -0.89
UBE3B-207ENST00000537063 RAB3IPQ96QF0 476 aaPredicted RBP9.51□□□□□ -0.89
UBE3B-207ENST00000537063 TSEN34Q9BSV6 310 aaKnown RBP9.51□□□□□ -0.89
UBE3B-207ENST00000537063 SLC13A1Q9BZW2 595 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 IL22Q9GZX6 179 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 SOX13Q9UN79 622 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 SCML2Q9UQR0 700 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 RPS6KL1Q9Y6S9 549 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 NUP205Q92621 2012 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 PLIN3O60664 434 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 PAGE1O75459 146 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 ATP5BP06576 529 aaKnown RBP9.51□□□□□ -0.89
UBE3B-207ENST00000537063 TARSP26639 723 aaKnown RBP9.51□□□□□ -0.89
UBE3B-207ENST00000537063 ARFIP2P53365 341 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 LIMK2P53671 638 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 KRT72Q14CN4 511 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 ANKRD20A4Q4UJ75 823 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 RNF180Q86T96 592 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 ZNF280BQ86YH2 543 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 ZNF683Q8IZ20 524 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 OR6Y1Q8NGX8 325 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 C8orf48Q96LL4 319 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 BFARQ9NZS9 450 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 DCDC2Q9UHG0 476 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 MAFKO60675 156 aa9.51□□□□□ -0.89
UBE3B-207ENST00000537063 PROCP04070 461 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms