RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CDH17Q12864 832 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 SLC39A12Q504Y0 691 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 CLLU1OSQ5K130 101 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 OTOAQ7RTW8 1153 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 TMEM135Q86UB9 458 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 MPP5Q8N3R9 675 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 ATPAF2Q8N5M1 289 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 PTCD2Q8WV60 388 aaKnown RBP13.89□□□□□ -0.19
SMG6-203ENST00000536871 FAM111AQ96PZ2 611 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 SMYD2Q9NRG4 433 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 CLIC5Q9NZA1 410 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 IL37Q9NZH6 218 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 ZFATQ9P243 1243 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 DCDC2Q9UHG0 476 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 MTO1Q9Y2Z2 717 aaKnown RBP13.89□□□□□ -0.19
SMG6-203ENST00000536871 PCDHB7Q9Y5E2 793 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 SRCAPQ6ZRS2 3230 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.89□□□□□ -0.19
SMG6-203ENST00000536871 H7C4K7 107 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 I6L893 689 aaPredicted RBP13.89□□□□□ -0.19
SMG6-203ENST00000536871 DDHD2O94830 711 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 UBOX5O94941 541 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 GRIA1P42261 906 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 RWDD4Q6NW29 188 aaKnown RBP13.89□□□□□ -0.19
SMG6-203ENST00000536871 TRMT10BQ6PF06 316 aaKnown RBP13.89□□□□□ -0.19
SMG6-203ENST00000536871 PACS1Q6VY07 963 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 CCDC33Q8N5R6 958 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 NPWQ8N729 165 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 DNAAF3Q8N9W5 541 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMG6-203ENST00000536871 SPPL2BQ8TCT7 592 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 CD99L2Q8TCZ2 262 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 CERS2Q96G23 380 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 C7orf26Q96N11 449 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 SIKE1Q9BRV8 207 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 TMEM175Q9BSA9 504 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 TRPV6Q9H1D0 765 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 RETREG1Q9H6L5 497 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 SLC40A1Q9NP59 571 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 SLC17A7Q9P2U7 560 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 RPS6KL1Q9Y6S9 549 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 FAM92AA1XBS5 289 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 KCNU1A8MYU2 1149 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 PITPNM1O00562 1244 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 MATN3O15232 486 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 ZBTB24O43167 697 aaPredicted RBP13.88□□□□□ -0.19
SMG6-203ENST00000536871 PAGE1O75459 146 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 INHAP05111 366 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 ITGB1P05556 798 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 CCNB1P14635 433 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 SPRP35270 261 aaPredicted RBP13.88□□□□□ -0.19
SMG6-203ENST00000536871 KPNA1P52294 538 aaPredicted RBP13.88□□□□□ -0.19
SMG6-203ENST00000536871 ILF2Q12905 390 aaKnown RBP13.88□□□□□ -0.19
SMG6-203ENST00000536871 MRPL58Q14197 206 aaKnown RBP13.88□□□□□ -0.19
SMG6-203ENST00000536871 LHX8Q68G74 356 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 ZNF280BQ86YH2 543 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 SCN4BQ8IWT1 228 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 NDUFAF2Q8N183 169 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 FITM2Q8N6M3 262 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 SCAMP5Q8TAC9 235 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 LRRN4Q8WUT4 740 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 C10orf82Q8WW14 230 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 SEPT8Q92599 483 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 DPF3Q92784 378 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 FCRL5Q96RD9 977 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 TMEM209Q96SK2 561 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 KLF6Q99612 283 aaPredicted RBP13.88□□□□□ -0.19
SMG6-203ENST00000536871 SAR1AQ9NR31 198 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 SYBUQ9NX95 663 aa13.88□□□□□ -0.19
SMG6-203ENST00000536871 ABI2Q9NYB9 513 aaPredicted RBP13.88□□□□□ -0.19
SMG6-203ENST00000536871 ALDH2P05091 517 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 IBSPP21815 317 aaPredicted RBP13.87□□□□□ -0.19
SMG6-203ENST00000536871 GEMP55040 296 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 CSE1LP55060 971 aaKnown RBP13.87□□□□□ -0.19
SMG6-203ENST00000536871 MLLT6P55198 1093 aaPredicted RBP13.87□□□□□ -0.19
SMG6-203ENST00000536871 MBTPS1Q14703 1052 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 CTXN3Q4LDR2 81 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 FAM133BQ5BKY9 247 aaKnown RBP13.87□□□□□ -0.19
SMG6-203ENST00000536871 VARS2Q5ST30 1063 aaKnown RBP13.87□□□□□ -0.19
SMG6-203ENST00000536871 SCD5Q86SK9 330 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 LCA5Q86VQ0 697 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 RASSF3Q86WH2 238 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 RTL3Q8N8U3 475 aaKnown RBP13.87□□□□□ -0.19
SMG6-203ENST00000536871 ATP6V0D2Q8N8Y2 350 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 PATJQ8NI35 1801 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 GABPB2Q8TAK5 448 aaPredicted RBP13.87□□□□□ -0.19
SMG6-203ENST00000536871 LINC01599Q8WXQ3 324 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 ISL2Q96A47 359 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 FCRL2Q96LA5 508 aaPredicted RBP13.87□□□□□ -0.19
SMG6-203ENST00000536871 RAB3IPQ96QF0 476 aaPredicted RBP13.87□□□□□ -0.19
SMG6-203ENST00000536871 CDK5RAP1Q96SZ6 601 aaKnown RBP13.87□□□□□ -0.19
SMG6-203ENST00000536871 IL12RB2Q99665 862 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 FAM96AQ9H5X1 160 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 ECT2Q9H8V3 914 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 SLCO1B3Q9NPD5 702 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 KLC4Q9NSK0 619 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 SIRPGQ9P1W8 387 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 PPARGC1AQ9UBK2 798 aaKnown RBP13.87□□□□□ -0.19
SMG6-203ENST00000536871 CHUKO15111 745 aa13.87□□□□□ -0.19
SMG6-203ENST00000536871 TIMM44O43615 452 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms