RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, human

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF1A-208	ENST00000536194	MYO1F	O00160	1098 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	CREB3	O43889	395 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	NDUFA10	O95299	355 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	DLD	P09622	509 aa	Known RBP	11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	HLA-E	P13747	358 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	DES	P17661	470 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	POLR2E	P19388	210 aa	Known RBP	11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	STK19	P49842	368 aa	Predicted RBP	11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	PLK1	P53350	603 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	AIF1	P55008	147 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	SLC12A1	Q13621	1099 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	ACAP1	Q15027	740 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	SMTNL2	Q2TAL5	461 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	ERMARD	Q5T6L9	678 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	RNF219	Q5W0B1	726 aa	Predicted RBP	11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	TRMT11	Q7Z4G4	463 aa	Known RBP	11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	RASSF3	Q86WH2	238 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	TMTC1	Q8IUR5	882 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	CAMKK1	Q8N5S9	505 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	ZNF366	Q8N895	744 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	MDGA1	Q8NFP4	955 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	RFFL	Q8WZ73	363 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	ATOH1	Q92858	354 aa	Predicted RBP	11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	TBC1D31	Q96DN5	1066 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	EIF3C	Q99613	913 aa	Known RBP	11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	BAG1	Q99933	345 aa	Predicted RBP	11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	GRPEL1	Q9HAV7	217 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	TMEM248	Q9NWD8	314 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	ZSCAN32	Q9NX65	697 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	INTU	Q9ULD6	942 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	NUP205	Q92621	2012 aa		11.63	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	TCRBV21S2A2	A0A5A6	115 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	RCCD1	A6NED2	376 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	PRPSAP2	O60256	369 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	SNAP91	O60641	907 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	LILRB5	O75023	590 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	MTA2	O94776	668 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	PROSC	O94903	275 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	APBB3	O95704	486 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	ATP5B	P06576	529 aa	Known RBP	11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	RHOC	P08134	193 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	RARA	P10276	462 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	RHOQ	P17081	205 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	GABRG2	P18507	467 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	GLDC	P23378	1020 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	OR1E1	P30953	314 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	CYLC1	P35663	651 aa	Predicted RBP	11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	DGKE	P52429	567 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	TAS2R40	P59535	323 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	SRSF5	Q13243	272 aa	Known RBP	11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	TCEAL1	Q15170	157 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	FNDC3B	Q53EP0	1204 aa	Known RBP	11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	KCNT1	Q5JUK3	1230 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	ANO7	Q6IWH7	933 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	RWDD4	Q6NW29	188 aa	Known RBP	11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	SERPINA13P	Q6UXR4	307 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	WDR5B	Q86VZ2	330 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	TSTD1	Q8NFU3	115 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	OR7D4	Q8NG98	312 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	RPL10L	Q96L21	214 aa	Known RBP	11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	EPAS1	Q99814	870 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	TPSD1	Q9BZJ3	242 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	MTG2	Q9H4K7	406 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	DHX35	Q9H5Z1	703 aa	Known RBP	11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	NOL6	Q9H6R4	1146 aa	Known RBP	11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	ZWILCH	Q9H900	591 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	EBF1	Q9UH73	591 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	DNAI1	Q9UI46	699 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	ERVW-1	Q9UQF0	538 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	PCDHA13	Q9Y5I0	950 aa		11.62	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	CEP192	Q8TEP8	1941 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	ILVBL	A1L0T0	632 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	WASH4P	A8MWX3	477 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	NPC1	O15118	1278 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	HR	O43593	1189 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	MOCS3	O95396	460 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	ASL	P04424	464 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	EPHX1	P07099	455 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	GOT1	P17174	413 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	EPHB2	P29323	1055 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	NBL1	P41271	181 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	MAGEA1	P43355	309 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	COPA	P53621	1224 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	NRL	P54845	237 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	OXCT1	P55809	520 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	TPI1	P60174	286 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	ECT2L	Q008S8	904 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	GNA12	Q03113	381 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	DPYSL2	Q16555	572 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	ATP13A4	Q4VNC1	1196 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	C6orf118	Q5T5N4	469 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	LONP2	Q86WA8	852 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	PSTK	Q8IV42	348 aa	Known RBP	11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	RHOT2	Q8IXI1	618 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	RTL3	Q8N8U3	475 aa	Known RBP	11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	ACRBP	Q8NEB7	543 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	HMGB4	Q8WW32	186 aa		11.61	□□□□□ -0.55
TNFRSF1A-208	ENST00000536194	HSPH1	Q92598	858 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms