RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MX2P20592 715 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 CRHR1P34998 444 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 SERPINB6P35237 376 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 GRIK1P39086 918 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 TEX44Q53QW1 395 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 CES4AQ5XG92 561 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 SPATA2LQ8IUW3 424 aaPredicted RBP13.69□□□□□ -0.22
VPS33B-202ENST00000535906 CDKL2Q92772 493 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 SKA1Q96BD8 255 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 NAT9Q9BTE0 207 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 MLPHQ9BV36 600 aaPredicted RBP13.69□□□□□ -0.22
VPS33B-202ENST00000535906 TMEM120AQ9BXJ8 343 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 BRD8Q9H0E9 1235 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 GBA3Q9H227 469 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 CXorf56Q9H5V9 222 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 RGS18Q9NS28 235 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 SFMBT1Q9UHJ3 866 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 RPS6KL1Q9Y6S9 549 aa13.69□□□□□ -0.22
VPS33B-202ENST00000535906 PATJQ8NI35 1801 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 INPPL1O15357 1258 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 IRAK2O43187 625 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 MSI1O43347 362 aaKnown RBP13.68□□□□□ -0.22
VPS33B-202ENST00000535906 DIAPH2O60879 1101 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 POLBP06746 335 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 RPSAP08865 295 aaKnown RBP13.68□□□□□ -0.22
VPS33B-202ENST00000535906 NFKB1P19838 968 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 TYMPP19971 482 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 CNTFP26441 200 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 CCNG1P51959 295 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 ZNF135P52742 658 aaPredicted RBP13.68□□□□□ -0.22
VPS33B-202ENST00000535906 CLLU1OSQ5K130 101 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 RWDD4Q6NW29 188 aaKnown RBP13.68□□□□□ -0.22
VPS33B-202ENST00000535906 TRAF7Q6Q0C0 670 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 RNF180Q86T96 592 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 GPATCH11Q8N954 259 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 STKLD1Q8NE28 680 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 LINC01599Q8WXQ3 324 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 OSBPL2Q9H1P3 480 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 ARHGEF38Q9NXL2 777 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 NUDT5Q9UKK9 219 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 RPL26L1Q9UNX3 145 aaKnown RBP13.68□□□□□ -0.22
VPS33B-202ENST00000535906 SQORQ9Y6N5 450 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 HAUS5O94927 633 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 PAX3P23760 479 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 SP3Q02447 781 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 SLC39A12Q504Y0 691 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 WASHC2DQ5SRD0 308 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 BTBD8Q5XKL5 378 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 ARHGAP36Q6ZRI8 547 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 BEND5Q7L4P6 421 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 SCD5Q86SK9 330 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 TRIM42Q8IWZ5 723 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 CASP10Q92851 521 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 RNPEPL1Q9HAU8 725 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 ABCC13Q9NSE7 274 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 UBP1Q9NZI7 540 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 VANGL2Q9ULK5 521 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 PCDHB8Q9UN66 801 aa13.68□□□□□ -0.22
VPS33B-202ENST00000535906 MTSS1O43312 755 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 PEX11AO75192 247 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 JCHAINP01591 159 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 SERPINB3P29508 390 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 DSC1Q08554 894 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 ARTNQ5T4W7 220 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 GLB1LQ6UWU2 654 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 C4orf50Q6ZRC1 276 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 SLC24A5Q71RS6 500 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 DNAAF3Q8N9W5 541 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 PTCD3Q96EY7 689 aaKnown RBP13.67□□□□□ -0.22
VPS33B-202ENST00000535906 CERS2Q96G23 380 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 TEKT5Q96M29 485 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 APOL2Q9BQE5 337 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 NMUR1Q9HB89 426 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 CASS4Q9NQ75 786 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 SIRPGQ9P1W8 387 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 ZFATQ9P243 1243 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 TRHDEQ9UKU6 1024 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 MAGED2Q9UNF1 606 aaPredicted RBP13.67□□□□□ -0.22
VPS33B-202ENST00000535906 MRPL42Q9Y6G3 142 aaKnown RBP13.67□□□□□ -0.22
VPS33B-202ENST00000535906 FRMPD3Q5JV73 1810 aa13.67□□□□□ -0.22
VPS33B-202ENST00000535906 ARHGAP42A6NI28 874 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 TPP1O14773 563 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 CCDC22O60826 627 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 AOC2O75106 756 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 PAGE1O75459 146 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 ZNF189O75820 626 aaPredicted RBP13.66□□□□□ -0.22
VPS33B-202ENST00000535906 CABYRO75952 493 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 ITGA2BP08514 1039 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 CALB2P22676 271 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 BST1Q10588 318 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 CERCAMQ5T4B2 595 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 MAP3K21Q5TCX8 1036 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 TMEM135Q86UB9 458 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 RASSF3Q86WH2 238 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 SCN4BQ8IWT1 228 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.66□□□□□ -0.22
VPS33B-202ENST00000535906 CNTD1Q8N815 330 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 SH3TC2Q8TF17 1288 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 TRIM62Q9BVG3 475 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 ZNF395Q9H8N7 513 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms