RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 PREPLQ4J6C6 727 aaPredicted RBP9.93□□□□□ -0.82
SSBP3-215ENST00000533946 MPP7Q5T2T1 576 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 SLC23A3Q6PIS1 610 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 SASS6Q6UVJ0 657 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 KDM7AQ6ZMT4 941 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 LEKR1Q6ZMV7 388 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 NUDT18Q6ZVK8 323 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 MARCH9Q86YJ5 346 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 RGL4Q8IZJ4 473 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 PYROXD2Q8N2H3 581 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 CCDC185Q8N715 623 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 TMEM35BQ8NCS4 154 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 OR7D4Q8NG98 312 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 RXFP2Q8WXD0 754 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 BAP1Q92560 729 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 PRCCQ92733 491 aaPredicted RBP9.93□□□□□ -0.82
SSBP3-215ENST00000533946 RNF34Q969K3 372 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 RPRD1AQ96P16 312 aaPredicted RBP9.93□□□□□ -0.82
SSBP3-215ENST00000533946 FEM1AQ9BSK4 669 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 SYT11Q9BT88 431 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 TRIM7Q9C029 511 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 NEUROG2Q9H2A3 272 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 SYNCQ9H7C4 482 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 ANO10Q9NW15 660 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.93□□□□□ -0.823e-6■■■□□ 16.7
SSBP3-215ENST00000533946 ASNSD1Q9NWL6 643 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 ARHGEF38Q9NXL2 777 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 DACH1Q9UI36 760 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 PLA2G4CQ9UP65 541 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 NEU3Q9UQ49 428 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 A0A1B0GVT2 93 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 A0A1W2PP55 124 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 TCRBV5S1A1TA0A578 114 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 FAM47DPA6NHR8 397 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 LRRC10BA6NIK2 292 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 METTL12A8MUP2 240 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 C10orf142B7Z368 130 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 F5H5T6 163 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 SART1O43290 800 aaKnown RBP9.92□□□□□ -0.82
SSBP3-215ENST00000533946 AP5Z1O43299 807 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 ATMINO43313 823 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-215ENST00000533946 TIMM44O43615 452 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 SRGAP2O75044 1071 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 NDUFS2O75306 463 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 ZNF821O75541 412 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-215ENST00000533946 GJB3O75712 270 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 ENDOD1O94919 500 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 CD160O95971 181 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 IGLV3-19P01714 112 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 WNT1P04628 370 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 IGHV4-34P06331 123 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 CTSLP07711 333 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 GLI1P08151 1106 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 MMP8P22894 467 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 CCR1P32246 355 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 RFC1P35251 1148 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-215ENST00000533946 DRD3P35462 400 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 PSMD8P48556 350 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 RPL7AP62424 266 aaKnown RBP9.92□□□□□ -0.82
SSBP3-215ENST00000533946 PPP2CBP62714 309 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 PPP2CAP67775 309 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 ECT2LQ008S8 904 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 DEUP1Q05D60 604 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 GRIK2Q13002 908 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 DAB2IPQ5VWQ8 1189 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 RNF219Q5W0B1 726 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-215ENST00000533946 IL31Q6EBC2 164 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 IRF2BP2Q7Z5L9 587 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 METTL3Q86U44 580 aaKnown RBP9.92□□□□□ -0.82
SSBP3-215ENST00000533946 MINDY1Q8N5J2 469 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 ATP6V0D2Q8N8Y2 350 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 CHST14Q8NCH0 376 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 WFIKKN2Q8TEU8 576 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 UCMAQ8WVF2 138 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 DNASE2BQ8WZ79 361 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 BIRC7Q96CA5 298 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 KLC2Q9H0B6 622 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 RSPH9Q9H1X1 276 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-215ENST00000533946 PDCL3Q9H2J4 239 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 TMEM9BQ9NQ34 198 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 EVLQ9UI08 416 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-215ENST00000533946 WASF3Q9UPY6 502 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 CA5BQ9Y2D0 317 aa9.92□□□□□ -0.82
SSBP3-215ENST00000533946 C2CD4BA6NLJ0 364 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 DRGXA6NNA5 263 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 TMCO5BA8MYB1 307 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 BNIP3LO60238 219 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 RTN2O75298 545 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 ZNF217O75362 1048 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 FSBPO95073 299 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 SERPINF2P08697 491 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 C7P10643 843 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 SKILP12757 684 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 RRM1P23921 792 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 GKP32189 559 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 ACVRL1P37023 503 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 NOVA1P51513 510 aaKnown RBP9.91□□□□□ -0.82
SSBP3-215ENST00000533946 HDAC4P56524 1084 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 DUOXA1Q1HG43 343 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 CLEC16AQ2KHT3 1053 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms