RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 PLEKHA7Q6IQ23 1121 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 SNX32Q86XE0 403 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 CLEC4DQ8WXI8 215 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 CPXM1Q96SM3 734 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 PLA2G4CQ9UP65 541 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 R3HDM2Q9Y2K5 976 aaKnown RBP17.88■□□□□ 0.45
PHRF1-205ENST00000533464 ERBB2P04626 1255 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 SLC2A4P14672 509 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 PGS1Q32NB8 556 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 ZBTB49Q6ZSB9 765 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 NEUROG2Q9H2A3 272 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 LHX5Q9H2C1 402 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 POLG2Q9UHN1 485 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 ALOX15BO15296 676 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 ZNF862O60290 1169 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 PDE5AO76074 875 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 FBXW4P57775 412 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 FASTKQ14296 549 aaKnown RBP17.87■□□□□ 0.45
PHRF1-205ENST00000533464 CCDC85BQ15834 202 aaPredicted RBP17.87■□□□□ 0.45
PHRF1-205ENST00000533464 PPTC7Q8NI37 304 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 PIWIL2Q8TC59 973 aaKnown RBP17.87■□□□□ 0.45
PHRF1-205ENST00000533464 DIS3LQ8TF46 1054 aaKnown RBP17.87■□□□□ 0.45
PHRF1-205ENST00000533464 DOLKQ9UPQ8 538 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 FAM237BA0A1B0GVD1 139 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 EPB42P16452 691 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 RIPOR1Q6ZS17 1223 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 NETO2Q8NC67 525 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 MYLPFQ96A32 169 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 PLEKHA8Q96JA3 519 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 EBNA1BP2Q99848 306 aaKnown RBP17.87■□□□□ 0.45
PHRF1-205ENST00000533464 B3GNT5Q9BYG0 378 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 POMKQ9H5K3 350 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 GIMAP4Q9NUV9 329 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 AVILO75366 819 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 CYP1A1P04798 512 aaPredicted RBP17.87■□□□□ 0.45
PHRF1-205ENST00000533464 CCNB1P14635 433 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 CAMK2GQ13555 558 aaPredicted RBP17.87■□□□□ 0.45
PHRF1-205ENST00000533464 RAP1GAP2Q684P5 730 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 C16orf59Q7L2K0 433 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 SLC44A2Q8IWA5 706 aaPredicted RBP17.87■□□□□ 0.45
PHRF1-205ENST00000533464 LENG9Q96B70 501 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 PARVBQ9HBI1 364 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 HPS4Q9NQG7 708 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 CCDC167Q9P0B6 97 aa17.87■□□□□ 0.45
PHRF1-205ENST00000533464 IFT172Q9UG01 1749 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 M0R3G1 203 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 FSBPO95073 299 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 JAM2P57087 298 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 MRPS5P82675 430 aaKnown RBP17.86■□□□□ 0.45
PHRF1-205ENST00000533464 IYDQ6PHW0 289 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 CENPLQ8N0S6 344 aaPredicted RBP17.86■□□□□ 0.45
PHRF1-205ENST00000533464 DHX33Q9H6R0 707 aaKnown RBP17.86■□□□□ 0.45
PHRF1-205ENST00000533464 EXOSC4Q9NPD3 245 aaKnown RBP17.86■□□□□ 0.45
PHRF1-205ENST00000533464 PCDHA11Q9Y5I1 949 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 BUD23O43709 281 aaKnown RBP17.86■□□□□ 0.45
PHRF1-205ENST00000533464 PROCP04070 461 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 FMO4P31512 558 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 ATP5C1P36542 298 aaKnown RBP17.86■□□□□ 0.45
PHRF1-205ENST00000533464 CROTQ9UKG9 612 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 GNG14A0A1W2PPG7 69 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 TCRBV7S2A1N4TA0A589 114 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 MGAT4DA6NG13 374 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 SRRM3A6NNA2 597 aaPredicted RBP17.86■□□□□ 0.45
PHRF1-205ENST00000533464 BTN3A1O00481 513 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 KRT6AP02538 564 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 KRT6BP04259 564 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 TSHRP16473 764 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 CD52P31358 61 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 KRT6CP48668 564 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 INHBEP58166 350 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 SLC34A1Q06495 639 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 PDK4Q16654 411 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 DUSP28Q4G0W2 176 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 METTL6Q8TCB7 284 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 FAM50BQ9Y247 325 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 CKBP12277 381 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 RAG1P15918 1043 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 CLK1P49759 484 aaKnown RBP17.86■□□□□ 0.45
PHRF1-205ENST00000533464 HPCAP84074 193 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 CDC16Q13042 620 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 MICU2Q8IYU8 434 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 SLCO1B3Q9NPD5 702 aa17.86■□□□□ 0.45
PHRF1-205ENST00000533464 CPSF4O95639 269 aaKnown RBP17.85■□□□□ 0.45
PHRF1-205ENST00000533464 CD86P42081 329 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 TSHZ1Q6ZSZ6 1077 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 LRRC57Q8N9N7 239 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 FNDC5Q8NAU1 212 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 ZNF229Q9UJW7 825 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 TCRBV9S1A1TA0A576 114 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 APOA1P02647 267 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 BST1Q10588 318 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 CASP10Q92851 521 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 CDRT15Q96T59 188 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 SH3GL1Q99961 368 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 NIFKQ9BYG3 293 aaKnown RBP17.85■□□□□ 0.45
PHRF1-205ENST00000533464 PCDH18Q9HCL0 1135 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 NDUFAF1Q9Y375 327 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 RAD51BO15315 384 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 ATP6V1B2P21281 511 aa17.85■□□□□ 0.45
PHRF1-205ENST00000533464 DRD4P21917 467 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms