RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 TRABD2AQ86V40 505 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 EMID1Q96A84 441 aaPredicted RBP12.47□□□□□ -0.41
BDNF-218ENST00000533246 CINPQ9BW66 212 aaPredicted RBP12.47□□□□□ -0.41
BDNF-218ENST00000533246 TAGLN3Q9UI15 199 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 KCNH4Q9UQ05 1017 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 PCDHB7Q9Y5E2 793 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 NFASCO94856 1347 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 TPP1O14773 563 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 PAPSS1O43252 624 aaPredicted RBP12.47□□□□□ -0.41
BDNF-218ENST00000533246 TRIM16O95361 564 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 MSX2P35548 267 aaPredicted RBP12.47□□□□□ -0.41
BDNF-218ENST00000533246 ALDH1A3P47895 512 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 MAXP61244 160 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 PUS10Q3MIT2 529 aaKnown RBP12.47□□□□□ -0.41
BDNF-218ENST00000533246 LRRC38Q5VT99 294 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 PLEKHA7Q6IQ23 1121 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 MRNIPQ6NTE8 343 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 B3GALNT2Q8NCR0 500 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 WNT8BQ93098 351 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 TMEM169Q96HH4 297 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 THUMPD3Q9BV44 507 aaKnown RBP12.47□□□□□ -0.41
BDNF-218ENST00000533246 POPDC2Q9HBU9 364 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 CCDC167Q9P0B6 97 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 DRG1Q9Y295 367 aaKnown RBP12.47□□□□□ -0.41
BDNF-218ENST00000533246 ZNF541Q9H0D2 1346 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 KLRG2A4D1S0 409 aaPredicted RBP12.47□□□□□ -0.41
BDNF-218ENST00000533246 SERPIND1P05546 499 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 HIST1H2AGP0C0S8 130 aaPredicted RBP12.47□□□□□ -0.41
BDNF-218ENST00000533246 HIST1H2ADP20671 130 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 OR1E1P30953 314 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 LRRC74AQ0VAA2 488 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 SLC39A12Q504Y0 691 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 C16orf89Q6UX73 402 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 ATP6V0D2Q8N8Y2 350 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 NLGN2Q8NFZ4 835 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 ZSCAN18Q8TBC5 510 aaPredicted RBP12.47□□□□□ -0.41
BDNF-218ENST00000533246 PYDC1Q8WXC3 89 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 PBXIP1Q96AQ6 731 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 NRBF2Q96F24 287 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 DCUN1D1Q96GG9 259 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 HIST1H2AHQ96KK5 128 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 HIST1H2AJQ99878 128 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 H2AFJQ9BTM1 129 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 CEP44Q9C0F1 390 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 EFCAB1Q9HAE3 211 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 EBF2Q9HAK2 575 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 NCKIPSDQ9NZQ3 722 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 KRT16P08779 473 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 ARHGDIAP52565 204 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 ATXN1P54253 815 aaKnown RBP12.46□□□□□ -0.41
BDNF-218ENST00000533246 CDH17Q12864 832 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 PMF1Q6P1K2 205 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 CYP2R1Q6VVX0 501 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 MIER2Q8N344 545 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 MRPL40Q9NQ50 206 aaKnown RBP12.46□□□□□ -0.41
BDNF-218ENST00000533246 THAP1Q9NVV9 213 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 CACNG4Q9UBN1 327 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 CRLS1Q9UJA2 301 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 DTNAQ9Y4J8 743 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 SOWAHBA6NEL2 793 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 F5H5T6 163 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 ALOX15BO15296 676 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 LYPLA1O75608 230 aaPredicted RBP12.46□□□□□ -0.41
BDNF-218ENST00000533246 OCM2P0CE71 109 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 OCMP0CE72 109 aaPredicted RBP12.46□□□□□ -0.41
BDNF-218ENST00000533246 THRAP10827 490 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 GRK2P25098 689 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 BRCC3P46736 316 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 SP2Q02086 613 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 OTOAQ7RTW8 1153 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 DDX53Q86TM3 631 aaKnown RBP12.46□□□□□ -0.41
BDNF-218ENST00000533246 GIPC3Q8TF64 312 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 BTBD10Q9BSF8 475 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 GID8Q9NWU2 228 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 PLA2G4CQ9UP65 541 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 SNCAIPQ9Y6H5 919 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 NALCNQ8IZF0 1738 aa12.46□□□□□ -0.41
BDNF-218ENST00000533246 ATP6AP2A0A1C7CYW4 349 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 DHX15O43143 795 aaKnown RBP12.46□□□□□ -0.42
BDNF-218ENST00000533246 GRIN3BO60391 1043 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 ATP6AP2O75787 350 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 BAIAP3O94812 1187 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 FKBP9O95302 570 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 PIGNO95427 931 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 SERPINE1P05121 402 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 SMIM10L2AP0DMW4 78 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 SMIM10L2BP0DMW5 78 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 NOS2P35228 1153 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 BLVRAP53004 296 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 WASHC5Q12768 1159 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 CTBP1Q13363 440 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 DCAF12L1Q5VU92 463 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 TLDC1Q6P9B6 456 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 FKBP9P1Q75LS8 142 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 CYP4X1Q8N118 509 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 ELMOD1Q8N336 334 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 MBOAT7Q96N66 472 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 ACSS3Q9H6R3 686 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 RNF112Q9ULX5 631 aa12.46□□□□□ -0.42
BDNF-218ENST00000533246 FAM50BQ9Y247 325 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms