RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SAP25Q8TEE9 199 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 KCNE4Q8WWG9 221 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 HIC2Q96JB3 615 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 DPH1Q9BZG8 443 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 BTBD1Q9H0C5 482 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 LHX5Q9H2C1 402 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 NHEJ1Q9H9Q4 299 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 EPN1Q9Y6I3 576 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 CYP26A1O43174 497 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 TLR5O60602 858 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 STAU1O95793 577 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 EPHX1P07099 455 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 FAM163BP0C2L3 166 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 ZDHHC11BP0C7U3 371 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 CCDC172P0C7W6 258 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 CKMT2P17540 419 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 PTPN1P18031 435 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 PRKCIP41743 596 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 ARRB1P49407 418 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 E2F1Q01094 437 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 ZNF234Q14588 700 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 EIF4HQ15056 248 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 WDR72Q3MJ13 1102 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 CCDC170Q8IYT3 715 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 OR2T3Q8NH03 318 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 BHMTQ93088 406 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 JAKMIP2Q96AA8 810 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 FAXDC2Q96IV6 333 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 CCDC42Q96M95 316 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 KLF16Q9BXK1 252 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 ZNF518BQ9C0D4 1074 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 NIF3L1Q9GZT8 377 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 HAUS4Q9H6D7 363 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 VRTNQ9H8Y1 702 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 TMEM30AQ9NV96 361 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 IL37Q9NZH6 218 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 ADAMTS1Q9UHI8 967 aa11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 BZW2Q9Y6E2 419 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-213ENST00000533149 ATP8B3O60423 1300 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 SSU72P8A0A1W2PR75 194 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 FAM92AA1XBS5 289 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 ESPNB1AK53 854 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 KLK10O43240 276 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 TIMM44O43615 452 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 TACC1O75410 805 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 KRT5P13647 590 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 PRKCHP24723 683 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 CLCN1P35523 988 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 CYLC1P35663 651 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 ATP5C1P36542 298 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 SLC5A3P53794 718 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 ERVPABLB-1P60509 514 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 ZBTB16Q05516 673 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 TDRD12Q587J7 1177 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 SERPINA13PQ6UXR4 307 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 SCARA5Q6ZMJ2 495 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 ZNF574Q6ZN55 896 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 ZNF571Q7Z3V5 609 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 ANKS1BQ7Z6G8 1248 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 UBR7Q8N806 425 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 OR6B3Q8NGW1 331 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 SCAMP5Q8TAC9 235 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 CYP3A43Q9HB55 503 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 SGK2Q9HBY8 427 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 TLR8Q9NR97 1041 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 ELOVL2Q9NXB9 296 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 PLK2Q9NYY3 685 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 PCDHB4Q9Y5E5 795 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 MYLKQ15746 1914 aa11.75□□□□□ -0.53
TRAPPC4-213ENST00000533149 KNL1Q8NG31 2342 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 EIF3CLB5ME19 914 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 CLDN5O00501 218 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 AKR1B10O60218 316 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 DXOO77932 396 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 NDUFA10O95299 355 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 C7P10643 843 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 P4HA1P13674 534 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 CD58P19256 250 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 MSNP26038 577 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 ASPAP45381 313 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 BPIFB4P59827 614 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 YWHAEP62258 255 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 INSM1Q01101 510 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 PTK2Q05397 1052 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 CAMK2GQ13555 558 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 GEN1Q17RS7 908 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 ASTE1Q2TB18 679 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 PRAMEF14Q5SWL7 426 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 KDM7AQ6ZMT4 941 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 C17orf53Q8N3J3 647 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 B3GALNT2Q8NCR0 500 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 KCNK16Q96T55 309 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 EIF3CQ99613 913 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 MRPL45Q9BRJ2 306 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 ORAI3Q9BRQ5 295 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 DESI2Q9BSY9 194 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 B3GNT5Q9BYG0 378 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 SDCBP2Q9H190 292 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 DEF6Q9H4E7 631 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms