RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 SLCO3A1Q9UIG8 710 aa31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 SNX10Q9Y5X0 201 aa31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 ITIH6Q6UXX5 1313 aa31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 TM4SF5O14894 197 aa31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 ENDOD1O94919 500 aa31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 DNTTP04053 509 aa31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 NUMBP49757 651 aa31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 WDR45BQ5MNZ6 344 aa31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 LRRC31Q6UY01 552 aa31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 FAM124AQ86V42 546 aa31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 ZNF683Q8IZ20 524 aa31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 RGL4Q8IZJ4 473 aa31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 RXFP2Q8WXD0 754 aa31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 RPL10LQ96L21 214 aaKnown RBP31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 RSPH9Q9H1X1 276 aaPredicted RBP31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 MYO6Q9UM54 1294 aa31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 TBC1D30Q9Y2I9 924 aa31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 PI4KAP42356 2102 aa31.18■■■□□ 2.58
SSSCA1-207ENST00000533115 MED19A0JLT2 244 aaPredicted RBP31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 TARSL2A2RTX5 802 aaKnown RBP31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 C4orf47A7E2U8 309 aa31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 CNTN5O94779 1100 aa31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 CFIP05156 583 aa31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 CALB1P05937 261 aa31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 STK19P49842 368 aaPredicted RBP31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 GSCP56915 257 aaPredicted RBP31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 ATP11AP98196 1134 aa31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 C9orf64Q5T6V5 341 aa31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 FAM131BQ86XD5 332 aa31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 OR52K2Q8NGK3 314 aa31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 JOSD2Q8TAC2 188 aa31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 ALG14Q96F25 216 aa31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 HAPLN3Q96S86 360 aa31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 FEM1AQ9BSK4 669 aa31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 TMEM9BQ9NQ34 198 aa31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 SLC6A14Q9UN76 642 aa31.17■■■□□ 2.58
SSSCA1-207ENST00000533115 A0A1B0GTH6 734 aa31.16■■■□□ 2.58
SSSCA1-207ENST00000533115 EDDM13A0A1B0GTR0 161 aa31.16■■■□□ 2.58
SSSCA1-207ENST00000533115 DRGXA6NNA5 263 aa31.16■■■□□ 2.58
SSSCA1-207ENST00000533115 PTMSP20962 102 aa31.16■■■□□ 2.58
SSSCA1-207ENST00000533115 SDC4P31431 198 aa31.16■■■□□ 2.58
SSSCA1-207ENST00000533115 NNMTP40261 264 aa31.16■■■□□ 2.58
SSSCA1-207ENST00000533115 CCDC14Q49A88 953 aa31.16■■■□□ 2.58
SSSCA1-207ENST00000533115 ALFQ53S48 1182 aa31.16■■■□□ 2.58
SSSCA1-207ENST00000533115 IRF2BP2Q7Z5L9 587 aa31.16■■■□□ 2.58
SSSCA1-207ENST00000533115 BAP1Q92560 729 aa31.16■■■□□ 2.58
SSSCA1-207ENST00000533115 NAP1L5Q96NT1 182 aaPredicted RBP31.16■■■□□ 2.58
SSSCA1-207ENST00000533115 OR51B4Q9Y5P0 310 aa31.16■■■□□ 2.58
SSSCA1-207ENST00000533115 A0A1W2PQC6 194 aa31.15■■■□□ 2.58
SSSCA1-207ENST00000533115 C2CD4BA6NLJ0 364 aa31.15■■■□□ 2.58
SSSCA1-207ENST00000533115 MEI4A8MW99 385 aa31.15■■■□□ 2.58
SSSCA1-207ENST00000533115 CDX4O14627 284 aaPredicted RBP31.15■■■□□ 2.58
SSSCA1-207ENST00000533115 RNASEH1O60930 286 aaKnown RBP31.15■■■□□ 2.58
SSSCA1-207ENST00000533115 GJB6O95452 261 aa31.15■■■□□ 2.58
SSSCA1-207ENST00000533115 SERPINF2P08697 491 aa31.15■■■□□ 2.58
SSSCA1-207ENST00000533115 KRT3P12035 628 aa31.15■■■□□ 2.58
SSSCA1-207ENST00000533115 C15orf59Q2T9L4 293 aaPredicted RBP31.15■■■□□ 2.58
SSSCA1-207ENST00000533115 TTC31Q49AM3 519 aaPredicted RBP31.15■■■□□ 2.58
SSSCA1-207ENST00000533115 IGLV3-10A0A075B6K4 115 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 METTL12A8MUP2 240 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 E9PAM4 449 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 ENGP17813 658 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 MAOBP27338 520 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 PTPN9P43378 593 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 CDO1Q16878 200 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 PPM1JQ5JR12 505 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 DCAF12L1Q5VU92 463 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 MON1BQ7L1V2 547 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 C3orf20Q8ND61 904 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 DNASE2BQ8WZ79 361 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 PTPRN2Q92932 1015 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 SELENOOQ9BVL4 669 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 PCED1AQ9H1Q7 454 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 CBX8Q9HC52 389 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 CAPN10Q9HC96 672 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 SUSD2Q9UGT4 822 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 VPS28Q9UK41 221 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 SCML1Q9UN30 329 aa31.14■■■□□ 2.58
SSSCA1-207ENST00000533115 SPTBN2O15020 2390 aa31.13■■■□□ 2.57
SSSCA1-207ENST00000533115 SERPINC1P01008 464 aa31.13■■■□□ 2.57
SSSCA1-207ENST00000533115 ACSL1P33121 698 aa31.13■■■□□ 2.57
SSSCA1-207ENST00000533115 VASPP50552 380 aaPredicted RBP31.13■■■□□ 2.57
SSSCA1-207ENST00000533115 GFPT1Q06210 699 aaPredicted RBP31.13■■■□□ 2.57
SSSCA1-207ENST00000533115 C1QBPQ07021 282 aaKnown RBP31.13■■■□□ 2.57
SSSCA1-207ENST00000533115 RAB6CQ53S08 254 aa31.13■■■□□ 2.57
SSSCA1-207ENST00000533115 SH3PXD2AQ5TCZ1 1133 aa31.13■■■□□ 2.57
SSSCA1-207ENST00000533115 DAB2IPQ5VWQ8 1189 aa31.13■■■□□ 2.57
SSSCA1-207ENST00000533115 BTBD1Q9H0C5 482 aa31.13■■■□□ 2.57
SSSCA1-207ENST00000533115 RAB6CQ9H0N0 254 aa31.13■■■□□ 2.57
SSSCA1-207ENST00000533115 MUC3BQ9H195 1237 aa31.13■■■□□ 2.57
SSSCA1-207ENST00000533115 PABPC3Q9H361 631 aaKnown RBP31.13■■■□□ 2.57
SSSCA1-207ENST00000533115 SLC25A13Q9UJS0 675 aa31.13■■■□□ 2.57
SSSCA1-207ENST00000533115 LRRC53A6NM62 1247 aa31.12■■■□□ 2.57
SSSCA1-207ENST00000533115 SRGAP2O75044 1071 aa31.12■■■□□ 2.57
SSSCA1-207ENST00000533115 RHOCP08134 193 aa31.12■■■□□ 2.57
SSSCA1-207ENST00000533115 GNSP15586 552 aa31.12■■■□□ 2.57
SSSCA1-207ENST00000533115 RFC1P35251 1148 aaPredicted RBP31.12■■■□□ 2.57
SSSCA1-207ENST00000533115 ARTNQ5T4W7 220 aa31.12■■■□□ 2.57
SSSCA1-207ENST00000533115 STRADAQ7RTN6 431 aa31.12■■■□□ 2.57
SSSCA1-207ENST00000533115 SETD3Q86TU7 594 aaPredicted RBP31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms