RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	TNS2	Q63HR2	1409 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791		A0A087X1B8	175 aa		19.89	■□□□□ 0.78
FGFR1-238	ENST00000532791	EML1	O00423	815 aa		19.89	■□□□□ 0.78
FGFR1-238	ENST00000532791	GJB6	O95452	261 aa		19.89	■□□□□ 0.78
FGFR1-238	ENST00000532791	SLC12A3	P55017	1021 aa		19.89	■□□□□ 0.78
FGFR1-238	ENST00000532791	BEX3	Q00994	111 aa		19.89	■□□□□ 0.78
FGFR1-238	ENST00000532791	CRY1	Q16526	586 aa		19.89	■□□□□ 0.78
FGFR1-238	ENST00000532791	TCHHL1	Q5QJ38	904 aa	Predicted RBP	19.89	■□□□□ 0.78
FGFR1-238	ENST00000532791	USP45	Q70EL2	814 aa		19.89	■□□□□ 0.78
FGFR1-238	ENST00000532791	GAD1	Q99259	594 aa		19.89	■□□□□ 0.78
FGFR1-238	ENST00000532791	C1QTNF7	Q9BXJ2	289 aa		19.89	■□□□□ 0.78
FGFR1-238	ENST00000532791	OPTC	Q9UBM4	332 aa		19.89	■□□□□ 0.78
FGFR1-238	ENST00000532791	NUDT14	O95848	222 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	RBL1	P28749	1068 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	XRCC4	Q13426	336 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	RRP1B	Q14684	758 aa	Known RBP	19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	DGKK	Q5KSL6	1271 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	NEK10	Q6ZWH5	1172 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	IDI2	Q9BXS1	227 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	ZDHHC6	Q9H6R6	413 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	ANKZF1	Q9H8Y5	726 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	MARCH2	Q9P0N8	246 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	ATP5B	P06576	529 aa	Known RBP	19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	FGD3	Q5JSP0	725 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	CYP20A1	Q6UW02	462 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	TPGS1	Q6ZTW0	290 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	POMGNT2	Q8NAT1	580 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	HGH1	Q9BTY7	390 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	SERHL2	Q9H4I8	314 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	SERHL	Q9NQF3	203 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	PDE5A	O76074	875 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	ETS1	P14921	441 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	CDK7	P50613	346 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	FAAP100	Q0VG06	881 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	FBXL19	Q6PCT2	694 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	ASB2	Q96Q27	587 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	NUDT5	Q9UKK9	219 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	MEGF6	O75095	1541 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	HOXB8	P17481	243 aa	Predicted RBP	19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	SERPINH1	P50454	418 aa	Known RBP	19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	CATSPERZ	Q9NTU4	200 aa		19.89	■□□□□ 0.77
FGFR1-238	ENST00000532791	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	FAM58BP	P0C7Q3	252 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	MAGEA10	P43363	369 aa	Predicted RBP	19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	DPYSL3	Q14195	570 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	C16orf72	Q14CZ0	275 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	INA	Q16352	499 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	STK40	Q8N2I9	435 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	SUSD6	Q92537	303 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	DUSP9	Q99956	384 aa	Known RBP	19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	UGT2B28	Q9BY64	529 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	ARHGAP28	Q9P2N2	729 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	ENOPH1	Q9UHY7	261 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	CRYL1	Q9Y2S2	319 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	LDLR	P01130	860 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	TKT	P29401	623 aa	Known RBP	19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	GPSM1	Q86YR5	675 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	STARD8	Q92502	1023 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	ARL15	Q9NXU5	204 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	PAICS	P22234	425 aa	Known RBP	19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	PLEKHA7	Q6IQ23	1121 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	SYT12	Q8IV01	421 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	SENP6	Q9GZR1	1112 aa	Predicted RBP	19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	POLR1D	Q9Y2S0	133 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791		H3BN98	237 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	PARP6	Q2NL67	630 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	CBWD6	Q4V339	395 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	ZNF557	Q8N988	423 aa	Predicted RBP	19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	BTBD10	Q9BSF8	475 aa		19.88	■□□□□ 0.77
FGFR1-238	ENST00000532791	USP12	O75317	370 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	FLT3	P36888	993 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	PURA	Q00577	322 aa	Known RBP	19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	PABPC1L	Q4VXU2	614 aa	Known RBP	19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	IL27RA	Q6UWB1	636 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	TRAPPC5	Q8IUR0	188 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	ATXN2L	Q8WWM7	1075 aa	Known RBP	19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	RNF145	Q96MT1	663 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	PORCN	Q9H237	461 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	TRIM17	Q9Y577	477 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	USP32	Q8NFA0	1604 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	TRDMT1	O14717	391 aa	Known RBP	19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	HS6ST1	O60243	411 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	PTPN1	P18031	435 aa	Known RBP	19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	DGKA	P23743	735 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	PLK1	P53350	603 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	GNA13	Q14344	377 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	COMMD2	Q86X83	199 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	GATAD2A	Q86YP4	633 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	KATNAL2	Q8IYT4	538 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	ACTRT2	Q8TDY3	377 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	WNT8B	Q93098	351 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	AGXT2	Q9BYV1	514 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	AK9	Q5TCS8	1911 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791		A0A088AWK7	358 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	FGF10	O15520	208 aa	Predicted RBP	19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	SH3BGRL	O75368	114 aa		19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	ZNF10	P21506	573 aa	Predicted RBP	19.87	■□□□□ 0.77
FGFR1-238	ENST00000532791	ATP5C1	P36542	298 aa	Known RBP	19.87	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms