RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 MYO19Q96H55 970 aa15.47■□□□□ 0.07
CPSF1-208ENST00000532560 ZYG11BQ9C0D3 744 aa15.47■□□□□ 0.07
CPSF1-208ENST00000532560 THAP2Q9H0W7 228 aa15.47■□□□□ 0.07
CPSF1-208ENST00000532560 RETREG1Q9H6L5 497 aa15.47■□□□□ 0.07
CPSF1-208ENST00000532560 MPP6Q9NZW5 540 aa15.47■□□□□ 0.07
CPSF1-208ENST00000532560 MYO1AQ9UBC5 1043 aa15.47■□□□□ 0.07
CPSF1-208ENST00000532560 ZNF212Q9UDV6 495 aa15.47■□□□□ 0.07
CPSF1-208ENST00000532560 RAB23Q9ULC3 237 aa15.47■□□□□ 0.07
CPSF1-208ENST00000532560 NEU3Q9UQ49 428 aa15.47■□□□□ 0.07
CPSF1-208ENST00000532560 AKR1B15C9JRZ8 316 aaPredicted RBP15.46■□□□□ 0.07
CPSF1-208ENST00000532560 SRGAP2O75044 1071 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 CYP1A2P05177 515 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 SRPRAP08240 638 aaKnown RBP15.46■□□□□ 0.07
CPSF1-208ENST00000532560 HLA-EP13747 358 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 MZF1P28698 734 aaPredicted RBP15.46■□□□□ 0.07
CPSF1-208ENST00000532560 P2RY2P41231 377 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 VASPP50552 380 aaPredicted RBP15.46■□□□□ 0.07
CPSF1-208ENST00000532560 ECT2LQ008S8 904 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 GFPT1Q06210 699 aaPredicted RBP15.46■□□□□ 0.07
CPSF1-208ENST00000532560 CAMK2GQ13555 558 aaPredicted RBP15.46■□□□□ 0.07
CPSF1-208ENST00000532560 EFHC2Q5JST6 749 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 C6orf118Q5T5N4 469 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 LAIR1Q6GTX8 287 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 SCYL2Q6P3W7 929 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 ZNF783Q6ZMS7 281 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 OR52K2Q8NGK3 314 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 SPACA7Q96KW9 195 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 MRGPRX3Q96LB0 322 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 MRGPRX1Q96LB2 322 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 FEM1AQ9BSK4 669 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 TRIM7Q9C029 511 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 DEF6Q9H4E7 631 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 FBRSQ9HAH7 460 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 FZD10Q9ULW2 581 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 ERVW-1Q9UQF0 538 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 OR51B4Q9Y5P0 310 aa15.46■□□□□ 0.07
CPSF1-208ENST00000532560 FAM72CH0Y354 149 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 LRIG2O94898 1065 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 RHOCP08134 193 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 C7P10643 843 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 RHOQP17081 205 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 L1CAMP32004 1257 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 CTSOP43234 321 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-208ENST00000532560 ST8SIA6P61647 398 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 BYSLQ13895 437 aaKnown RBP15.45■□□□□ 0.06
CPSF1-208ENST00000532560 HNRNPA1L2Q32P51 320 aaKnown RBP15.45■□□□□ 0.06
CPSF1-208ENST00000532560 FAM72AQ5TYM5 149 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 RNF219Q5W0B1 726 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-208ENST00000532560 FAM72DQ6L9T8 149 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 TFAP2DQ7Z6R9 452 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 NLRP14Q86W24 1093 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 FAM72BQ86X60 149 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 PGBD3Q8N328 593 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 ARFGAP1Q8N6T3 406 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 OR2T3Q8NH03 318 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 TBC1D31Q96DN5 1066 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 ZC3H10Q96K80 434 aaKnown RBP15.45■□□□□ 0.06
CPSF1-208ENST00000532560 NCAPGQ9BPX3 1015 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 NUP85Q9BW27 656 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 MKRN2Q9H000 416 aaKnown RBP15.45■□□□□ 0.06
CPSF1-208ENST00000532560 MUC3BQ9H195 1237 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 VPS28Q9UK41 221 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 ZKSCAN5Q9Y2L8 839 aa15.45■□□□□ 0.06
CPSF1-208ENST00000532560 GPR179Q6PRD1 2367 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 MYO15AQ9UKN7 3530 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 OTOGLQ3ZCN5 2332 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 ILVBLA1L0T0 632 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 EIF3CLB5ME19 914 aaKnown RBP15.44■□□□□ 0.06
CPSF1-208ENST00000532560 AKR1B10O60218 316 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 ZNF217O75362 1048 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 RNF8O76064 485 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 OR1E1P30953 314 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 MAPKAPK2P49137 400 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 COPAP53621 1224 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 GALCP54803 685 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 SEMA3BQ13214 749 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 ACAP1Q15027 740 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 MAP7D1Q3KQU3 841 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 PLK5Q496M5 336 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.44■□□□□ 0.06
CPSF1-208ENST00000532560 METTL3Q86U44 580 aaKnown RBP15.44■□□□□ 0.06
CPSF1-208ENST00000532560 KBTBD6Q86V97 674 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 FAM160A2Q8N612 972 aaPredicted RBP15.44■□□□□ 0.06
CPSF1-208ENST00000532560 ZNF366Q8N895 744 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 NIPA2Q8N8Q9 360 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 TC2NQ8N9U0 490 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 DCAF4L2Q8NA75 395 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 RUBCNQ92622 972 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 ARHGEF26Q96DR7 871 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 ERLEC1Q96DZ1 483 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 EIF3CQ99613 913 aaKnown RBP15.44■□□□□ 0.06
CPSF1-208ENST00000532560 EPAS1Q99814 870 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 NHEJ1Q9H9Q4 299 aaPredicted RBP15.44■□□□□ 0.06
CPSF1-208ENST00000532560 TMEM248Q9NWD8 314 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 SUN2Q9UH99 717 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 GMEB2Q9UKD1 530 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 AP4E1Q9UPM8 1137 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 SPAG17Q6Q759 2223 aa15.44■□□□□ 0.06
CPSF1-208ENST00000532560 DCLK1O15075 740 aa15.43■□□□□ 0.06
CPSF1-208ENST00000532560 LRCH4O75427 683 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms