RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CNGB3Q9NQW8 809 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TBC1D3DA0A087WVF3 549 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TBC1D3IA0A087WXS9 549 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TBC1D3EA0A087X179 549 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TBC1D3KA0A087X1G2 549 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TBC1D3FA6NER0 549 aaPredicted RBP11.52□□□□□ -0.57
PTPRK-221ENST00000532331 CCT8L1PA6NM43 557 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TBC1D3LB9A6J9 549 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 C8AP07357 584 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TBC1D3HP0C7X1 549 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 PCNAP12004 261 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 IRAK1P51617 712 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 NCALDP61601 193 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 SKP1P63208 163 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 AAK1Q2M2I8 961 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 NT5DC1Q5TFE4 455 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TBC1D3GQ6DHY5 549 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TBC1D3CQ6IPX1 549 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 STRA8Q7Z7C7 330 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 SLC9A9Q8IVB4 645 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TBC1D3Q8IZP1 549 aaPredicted RBP11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TUBGCP3Q96CW5 907 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 ZNF333Q96JL9 665 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 PANX3Q96QZ0 392 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 CCDC134Q9H6E4 229 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TXNRD2Q9NNW7 524 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 DUS2Q9NX74 493 aaKnown RBP11.52□□□□□ -0.57
PTPRK-221ENST00000532331 BLOC1S6Q9UL45 172 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 GPSM3Q9Y4H4 160 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 ASTN1O14525 1302 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 MARSP56192 900 aaKnown RBP11.52□□□□□ -0.57
PTPRK-221ENST00000532331 BTKQ06187 659 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 LAYNQ6UX15 382 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 MARK2Q7KZI7 788 aaKnown RBP11.52□□□□□ -0.57
PTPRK-221ENST00000532331 SLC26A11Q86WA9 606 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 WDR48Q8TAF3 677 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 MDM1Q8TC05 714 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 JADE3Q92613 823 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TBL1YQ9BQ87 522 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 ECSITQ9BQ95 431 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TM6SF2Q9BZW4 377 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 MORF4L1Q9UBU8 362 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 ZNF112Q9UJU3 913 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 DTNAQ9Y4J8 743 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 IGF2BP3O00425 579 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTPRK-221ENST00000532331 GRM6O15303 877 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 ZNF862O60290 1169 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 RBP1P09455 135 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 MAPK1P28482 360 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 ARL2P36404 184 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 ACTL9Q8TC94 416 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 SOHLH2Q9NX45 425 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 DNPEPQ9ULA0 475 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 BAZ2BQ9UIF8 2168 aaKnown RBP11.51□□□□□ -0.57
PTPRK-221ENST00000532331 GPC1P35052 558 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 KRT20P35900 424 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 ANXA11P50995 505 aaKnown RBP11.51□□□□□ -0.57
PTPRK-221ENST00000532331 COPAP53621 1224 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 HTRA3P83110 453 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 GDF6Q6KF10 455 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-221ENST00000532331 B4GALNT2Q8NHY0 566 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 MCOLN3Q8TDD5 553 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 RSPH1Q8WYR4 309 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 CXorf40BQ96DE9 158 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 MED8Q96G25 268 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 PAFAH2Q99487 392 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 L2HGDHQ9H9P8 463 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 PCDH9Q9HC56 1237 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 AVENQ9NQS1 362 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-221ENST00000532331 H2AFY2Q9P0M6 372 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-221ENST00000532331 RFX3P48380 749 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 SEC24CP53992 1094 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 GRSF1Q12849 480 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTPRK-221ENST00000532331 ITGA9Q13797 1035 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 KDM7AQ6ZMT4 941 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 CDC42EP4Q9H3Q1 356 aaKnown RBP11.51□□□□□ -0.57
PTPRK-221ENST00000532331 PHTF1Q9UMS5 762 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 NRXN3Q9Y4C0 1643 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 A0A0B4J269 797 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 B4GALT4O60513 344 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 SOX11P35716 441 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 ERVK-21P61565 698 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 MRPS5P82675 430 aaKnown RBP11.51□□□□□ -0.57
PTPRK-221ENST00000532331 MBTD1Q05BQ5 628 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 ARHGAP1Q07960 439 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 FAM9CQ8IZT9 166 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 SPATA20Q8TB22 786 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 DNAJC19Q96DA6 116 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 GMLQ99445 158 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 DUSP9Q99956 384 aaKnown RBP11.51□□□□□ -0.57
PTPRK-221ENST00000532331 DHX33Q9H6R0 707 aaKnown RBP11.51□□□□□ -0.57
PTPRK-221ENST00000532331 SLC24A2Q9UI40 661 aa11.51□□□□□ -0.57
PTPRK-221ENST00000532331 SKAP2O75563 359 aaPredicted RBP11.5□□□□□ -0.57
PTPRK-221ENST00000532331 MPP3Q13368 585 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 LRRC36Q1X8D7 754 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 INTS6LQ5JSJ4 861 aaKnown RBP11.5□□□□□ -0.57
PTPRK-221ENST00000532331 FOXR1Q6PIV2 292 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 MAGEC3Q8TD91 643 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 CYGBQ8WWM9 190 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 MLPHQ9BV36 600 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms