RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	AGBL4	Q5VU57	503 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	FUT10	Q6P4F1	479 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	KBTBD6	Q86V97	674 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	CNPY4	Q8N129	248 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	SRBD1	Q8N5C6	995 aa	Known RBP	6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	LNX1	Q8TBB1	728 aa	Predicted RBP	6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	PIBF1	Q8WXW3	757 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	ERCC4	Q92889	916 aa	Predicted RBP	6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	MSANTD3	Q96H12	275 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	B3GALT6	Q96L58	329 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	FDXACB1	Q9BRP7	624 aa	Predicted RBP	6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	ORAI3	Q9BRQ5	295 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	TRMT61B	Q9BVS5	477 aa	Known RBP	6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	IFT122	Q9HBG6	1241 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	CD248	Q9HCU0	757 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	UBN1	Q9NPG3	1134 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	TBC1D22B	Q9NU19	505 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	AGPAT5	Q9NUQ2	364 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	MIOS	Q9NXC5	875 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	SEC63	Q9UGP8	760 aa	Known RBP	6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	EVL	Q9UI08	416 aa	Predicted RBP	6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	ST6GALNAC2	Q9UJ37	374 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	OAZ3	Q9UMX2	235 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	PIN4	Q9Y237	131 aa	Known RBP	6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	PRG3	Q9Y2Y8	225 aa	Predicted RBP	6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	NUP205	Q92621	2012 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	VWA8	A3KMH1	1905 aa		6.21	□□□□□ -1.42
PUM1-222	ENST00000531867	DSP	P15924	2871 aa	Known RBP	6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	NBEA	Q8NFP9	2946 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	ASCC3	Q8N3C0	2202 aa	Known RBP	6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	DDX39A	O00148	427 aa	Known RBP	6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	IPO5	O00410	1097 aa	Known RBP	6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	CDX4	O14627	284 aa	Predicted RBP	6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	IFIT3	O14879	490 aa	Known RBP	6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	CCL16	O15467	120 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	ARHGAP6	O43182	974 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	GAS7	O60861	476 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	RPP40	O75818	363 aa	Known RBP	6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	STBD1	O95210	358 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	CYP3A4	P08684	503 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	HOXC13	P31276	330 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	OR1G1	P47890	313 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	TBX2	Q13207	712 aa	Predicted RBP	6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	LRRC32	Q14392	662 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	ELF2	Q15723	593 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	LONRF1	Q17RB8	773 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	SLC5A9	Q2M3M2	681 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	ATP13A4	Q4VNC1	1196 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	PABPC1L	Q4VXU2	614 aa	Known RBP	6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	DGKK	Q5KSL6	1271 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	C20orf194	Q5TEA3	1177 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	DAB2IP	Q5VWQ8	1189 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	TRIM68	Q6AZZ1	485 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	TCEAL6	Q6IPX3	200 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	SRGAP1	Q7Z6B7	1085 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	CBARP	Q8N350	705 aa	Predicted RBP	6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	NKAP	Q8N5F7	415 aa	Known RBP	6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	KIAA1958	Q8N8K9	716 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	CNNM3	Q8NE01	707 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	PARD3B	Q8TEW8	1205 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	TCEAL3	Q969E4	200 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	MCRS1	Q96EZ8	462 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	AHCYL2	Q96HN2	611 aa	Known RBP	6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	TBATA	Q96M53	351 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	EDEM2	Q9BV94	578 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	COLEC11	Q9BWP8	271 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	ANO3	Q9BYT9	981 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	KLC2	Q9H0B6	622 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	RSPH9	Q9H1X1	276 aa	Predicted RBP	6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	OR10A2	Q9H208	303 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	DEF6	Q9H4E7	631 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	BRD9	Q9H8M2	597 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	FAM204A	Q9H8W3	233 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	TRPV4	Q9HBA0	871 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	ANLN	Q9NQW6	1124 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	NRBP2	Q9NSY0	501 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	HCFC1R1	Q9NWW0	138 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	ADAM28	Q9UKQ2	775 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	KLK13	Q9UKR3	277 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	NOL7	Q9UMY1	257 aa	Known RBP	6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	VWA7	Q9Y334	891 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	TSC22D4	Q9Y3Q8	395 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	PIAS3	Q9Y6X2	628 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	LOC400499	M0QZD8	3231 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	IGSF10	Q6WRI0	2623 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	NAV2	Q8IVL1	2488 aa		6.2	□□□□□ -1.42
PUM1-222	ENST00000531867	ZMYM2	Q9UBW7	1377 aa		6.19	□□□□□ -1.42
PUM1-222	ENST00000531867	LAMA5	O15230	3695 aa		6.19	□□□□□ -1.42
PUM1-222	ENST00000531867	UBA6	A0AVT1	1052 aa	Predicted RBP	6.19	□□□□□ -1.42
PUM1-222	ENST00000531867	LNP1	A1A4G5	178 aa		6.19	□□□□□ -1.42
PUM1-222	ENST00000531867	ARHGEF37	A1IGU5	675 aa		6.19	□□□□□ -1.42
PUM1-222	ENST00000531867	BCLAF3	A2AJT9	711 aa	Known RBP	6.19	□□□□□ -1.42
PUM1-222	ENST00000531867	MYBPHL	A2RUH7	354 aa		6.19	□□□□□ -1.42
PUM1-222	ENST00000531867	ARL5C	A6NH57	179 aa		6.19	□□□□□ -1.42
PUM1-222	ENST00000531867	ADAM12	O43184	909 aa		6.19	□□□□□ -1.42
PUM1-222	ENST00000531867	PLEKHA8P1	O95397	391 aa		6.19	□□□□□ -1.42
PUM1-222	ENST00000531867	PRL	P01236	227 aa		6.19	□□□□□ -1.42
PUM1-222	ENST00000531867	RHO	P08100	348 aa		6.19	□□□□□ -1.42
PUM1-222	ENST00000531867	PSMC3	P17980	439 aa		6.19	□□□□□ -1.42
PUM1-222	ENST00000531867	CR2	P20023	1033 aa		6.19	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms