RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 AP3B1O00203 1094 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 TBX10O75333 385 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 LYPLA1O75608 230 aaPredicted RBP17.24■□□□□ 0.35
VPS26B-206ENST00000531741 MPOP05164 745 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 NPY2RP49146 381 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 ABCE1P61221 599 aaKnown RBP17.24■□□□□ 0.35
VPS26B-206ENST00000531741 MAP2K5Q13163 448 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 RCN2Q14257 317 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 ZRSR2Q15696 482 aaKnown RBP17.24■□□□□ 0.35
VPS26B-206ENST00000531741 MUM1Q2TAK8 710 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 C6orf163Q5TEZ5 329 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 LRRC74BQ6ZQY2 392 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 ULK2Q8IYT8 1036 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 FBXO27Q8NI29 283 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 FAM161BQ96MY7 647 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 ANLNQ9NQW6 1124 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 DONSONQ9NYP3 566 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 CIB2O75838 187 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 AP1G2O75843 785 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 LTFP02788 710 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 RALBP11234 206 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 YBX3P16989 372 aaKnown RBP eCLIP17.23■□□□□ 0.35
VPS26B-206ENST00000531741 DNAJB2P25686 324 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 SERPINB6P35237 376 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 CPOXP36551 454 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 CSE1LP55060 971 aaKnown RBP17.23■□□□□ 0.35
VPS26B-206ENST00000531741 ACTR3P61158 418 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 KDSRQ06136 332 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 ZNF33AQ06730 810 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 THOC5Q13769 683 aaKnown RBP17.23■□□□□ 0.35
VPS26B-206ENST00000531741 ANKRD20A4Q4UJ75 823 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 CLEC14AQ86T13 490 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 KLHDC8BQ8IXV7 354 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 DCLK2Q8N568 766 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 ZMIZ2Q8NF64 920 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 ZNF669Q96BR6 464 aaPredicted RBP17.23■□□□□ 0.35
VPS26B-206ENST00000531741 MCMBPQ9BTE3 642 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 COLEC11Q9BWP8 271 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 CDH9Q9ULB4 789 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 SOX13Q9UN79 622 aa17.23■□□□□ 0.35
VPS26B-206ENST00000531741 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.23■□□□□ 0.35
VPS26B-206ENST00000531741 GLTPD2A6NH11 291 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 ZNF195O14628 629 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 CPA3P15088 417 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 CD68P34810 354 aaPredicted RBP17.22■□□□□ 0.35
VPS26B-206ENST00000531741 PPM1JQ5JR12 505 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 ANO7Q6IWH7 933 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 TAF2Q6P1X5 1199 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 KIRREL3Q8IZU9 778 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 NPWQ8N729 165 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 GSTCDQ8NEC7 633 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 NRG4Q8WWG1 115 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 DPF3Q92784 378 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 PCED1BQ96HM7 432 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 ZFP42Q96MM3 310 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 EPAS1Q99814 870 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 PTPN18Q99952 460 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 GPAMQ9HCL2 828 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 PCDHB12Q9Y5F1 795 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 A6NHS1 94 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 HHLA1C9JL84 531 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 ZBTB24O43167 697 aaPredicted RBP17.22■□□□□ 0.35
VPS26B-206ENST00000531741 TIMM44O43615 452 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 NCAM1P13591 858 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 HADHAP40939 763 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 CXCR3P49682 368 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 MRPS35P82673 323 aaKnown RBP17.22■□□□□ 0.35
VPS26B-206ENST00000531741 UBAP2LQ14157 1087 aaKnown RBP17.22■□□□□ 0.35
VPS26B-206ENST00000531741 FSTL4Q6MZW2 842 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 CES3Q6UWW8 571 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 BHLHA9Q7RTU4 235 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 MAVSQ7Z434 540 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 STRA8Q7Z7C7 330 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 IRGQQ8WZA9 623 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 MLPHQ9BV36 600 aaPredicted RBP17.22■□□□□ 0.35
VPS26B-206ENST00000531741 IL22Q9GZX6 179 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 ZNF408Q9H9D4 720 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 DDIT4Q9NX09 232 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 ANGPTL2Q9UKU9 493 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 LRCH1Q9Y2L9 728 aa17.22■□□□□ 0.35
VPS26B-206ENST00000531741 SIN3BO75182 1162 aa17.21■□□□□ 0.35
VPS26B-206ENST00000531741 H2AFYO75367 372 aaKnown RBP17.21■□□□□ 0.35
VPS26B-206ENST00000531741 MYL3P08590 195 aa17.21■□□□□ 0.35
VPS26B-206ENST00000531741 IDH3AP50213 366 aa17.21■□□□□ 0.35
VPS26B-206ENST00000531741 SPRYD7Q5W111 196 aa17.21■□□□□ 0.35
VPS26B-206ENST00000531741 TRIM68Q6AZZ1 485 aa17.21■□□□□ 0.35
VPS26B-206ENST00000531741 PM20D1Q6GTS8 502 aa17.21■□□□□ 0.35
VPS26B-206ENST00000531741 GPRIN1Q7Z2K8 1008 aa17.21■□□□□ 0.35
VPS26B-206ENST00000531741 MYLK4Q86YV6 388 aaPredicted RBP17.21■□□□□ 0.35
VPS26B-206ENST00000531741 SCML4Q8N228 414 aa17.21■□□□□ 0.35
VPS26B-206ENST00000531741 DNAAF3Q8N9W5 541 aa17.21■□□□□ 0.35
VPS26B-206ENST00000531741 FAM136AQ96C01 138 aa17.21■□□□□ 0.35
VPS26B-206ENST00000531741 SMARCD1Q96GM5 515 aa17.21■□□□□ 0.35
VPS26B-206ENST00000531741 CSNK1G1Q9HCP0 422 aa17.21■□□□□ 0.35
VPS26B-206ENST00000531741 SLC7A8Q9UHI5 535 aa17.21■□□□□ 0.35
VPS26B-206ENST00000531741 MYBPHLA2RUH7 354 aa17.2■□□□□ 0.34
VPS26B-206ENST00000531741 TMEM114B3SHH9 223 aa17.2■□□□□ 0.34
VPS26B-206ENST00000531741 PSMD3O43242 534 aa17.2■□□□□ 0.34
VPS26B-206ENST00000531741 AMHP03971 560 aa17.2■□□□□ 0.34
VPS26B-206ENST00000531741 ARRB2P32121 409 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms