RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 P3H4Q92791 437 aa18.12■□□□□ 0.49
CTSB-222ENST00000531551 HEBP1Q9NRV9 189 aa18.12■□□□□ 0.49
CTSB-222ENST00000531551 PGRMC1O00264 195 aaKnown RBP18.11■□□□□ 0.49
CTSB-222ENST00000531551 CES2O00748 559 aa18.11■□□□□ 0.49
CTSB-222ENST00000531551 PECAM1P16284 738 aaPredicted RBP18.11■□□□□ 0.49
CTSB-222ENST00000531551 POLD3Q15054 466 aaPredicted RBP18.11■□□□□ 0.49
CTSB-222ENST00000531551 PAFAH1B3Q15102 231 aaKnown RBP18.11■□□□□ 0.49
CTSB-222ENST00000531551 SETD3Q86TU7 594 aaPredicted RBP18.11■□□□□ 0.49
CTSB-222ENST00000531551 LZTR1Q8N653 840 aa18.11■□□□□ 0.49
CTSB-222ENST00000531551 FIBINQ8TAL6 211 aa18.11■□□□□ 0.49
CTSB-222ENST00000531551 SPON2Q9BUD6 331 aa18.11■□□□□ 0.49
CTSB-222ENST00000531551 SLC39A8Q9C0K1 460 aa18.11■□□□□ 0.49
CTSB-222ENST00000531551 RETREG1Q9H6L5 497 aa18.11■□□□□ 0.49
CTSB-222ENST00000531551 ABCB8Q9NUT2 735 aa18.11■□□□□ 0.49
CTSB-222ENST00000531551 TBC1D30Q9Y2I9 924 aa18.11■□□□□ 0.49
CTSB-222ENST00000531551 A0A0D9SEW6 157 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 C19orf67A6NJJ6 358 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 CACNG3O60359 315 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 TULP3O75386 442 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 SRFP11831 508 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 TGM2P21980 687 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 MZF1P28698 734 aaPredicted RBP18.1■□□□□ 0.49
CTSB-222ENST00000531551 CD70P32970 193 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 CSKP41240 450 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 PAFAH1B1P43034 410 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 DGKGP49619 791 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 PFKPQ01813 784 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 LMAN2Q12907 356 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 NAIF1Q69YI7 327 aaPredicted RBP18.1■□□□□ 0.49
CTSB-222ENST00000531551 IL31Q6EBC2 164 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 CREG2Q8IUH2 290 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 OR7D4Q8NG98 312 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 ACTRT1Q8TDG2 376 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 LRRN4Q8WUT4 740 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 PRDM16Q9HAZ2 1276 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 DTLQ9NZJ0 730 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 KIAA1522Q9P206 1035 aaPredicted RBP18.1■□□□□ 0.49
CTSB-222ENST00000531551 DEC1Q9P2X7 70 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 VCANP13611 3396 aa18.1■□□□□ 0.49
CTSB-222ENST00000531551 RASA4BC9J798 803 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 APOC4-APOC2K7ER74 178 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 RASA4O43374 803 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 APOC2P02655 101 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 HLA-FP30511 346 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 ACVRL1P37023 503 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 GNA12Q03113 381 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 KDSRQ06136 332 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 SLC10A2Q12908 348 aaPredicted RBP18.09■□□□□ 0.49
CTSB-222ENST00000531551 KLF1Q13351 362 aaPredicted RBP18.09■□□□□ 0.49
CTSB-222ENST00000531551 GAB4Q2WGN9 574 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 ASTLQ6HA08 431 aaPredicted RBP18.09■□□□□ 0.49
CTSB-222ENST00000531551 RNF135Q8IUD6 432 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 UMODL1-AS1Q8N2C9 162 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 ZNF557Q8N988 423 aaPredicted RBP18.09■□□□□ 0.49
CTSB-222ENST00000531551 DNASE1L2Q92874 299 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 HMCESQ96FZ2 354 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 NAP1L3Q99457 506 aaPredicted RBP18.09■□□□□ 0.49
CTSB-222ENST00000531551 AP1M1Q9BXS5 423 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 KLC2Q9H0B6 622 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 NOL6Q9H6R4 1146 aaKnown RBP18.09■□□□□ 0.49
CTSB-222ENST00000531551 VPS28Q9UK41 221 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 SORCS3Q9UPU3 1222 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 PIAS3Q9Y6X2 628 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 ILVBLA1L0T0 632 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 NDST2P52849 883 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 OTUD4Q01804 1114 aaKnown RBP18.09■□□□□ 0.49
CTSB-222ENST00000531551 GRAMD4Q6IC98 578 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 B4GALNT4Q76KP1 1039 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 ZC3H18Q86VM9 953 aaKnown RBP18.09■□□□□ 0.49
CTSB-222ENST00000531551 ARHGAP12Q8IWW6 846 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 ETFBKMTQ8IXQ9 262 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 GJD3Q8N144 294 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 ACTL9Q8TC94 416 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 MAIP1Q8WWC4 291 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 SLC2A11Q9BYW1 496 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 ATP13A1Q9HD20 1204 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 GGA2Q9UJY4 613 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 DUSP12Q9UNI6 340 aa18.09■□□□□ 0.49
CTSB-222ENST00000531551 R3HDM2Q9Y2K5 976 aaKnown RBP18.09■□□□□ 0.49
CTSB-222ENST00000531551 NR2C2P49116 596 aa18.08■□□□□ 0.49
CTSB-222ENST00000531551 PAPOLAP51003 745 aaKnown RBP18.08■□□□□ 0.49
CTSB-222ENST00000531551 IER5LQ5T953 404 aa18.08■□□□□ 0.49
CTSB-222ENST00000531551 RNF43Q68DV7 783 aa18.08■□□□□ 0.49
CTSB-222ENST00000531551 APCDD1Q8J025 514 aa18.08■□□□□ 0.49
CTSB-222ENST00000531551 CCNYQ8ND76 341 aa18.08■□□□□ 0.49
CTSB-222ENST00000531551 C1orf54Q8WWF1 131 aa18.08■□□□□ 0.49
CTSB-222ENST00000531551 ARHGEF2Q92974 986 aaKnown RBP18.08■□□□□ 0.49
CTSB-222ENST00000531551 CHFRQ96EP1 664 aa18.08■□□□□ 0.49
CTSB-222ENST00000531551 NECAB3Q96P71 396 aaPredicted RBP18.08■□□□□ 0.49
CTSB-222ENST00000531551 MAGEH1Q9H213 219 aa18.08■□□□□ 0.49
CTSB-222ENST00000531551 LRRC19Q9H756 370 aa18.08■□□□□ 0.49
CTSB-222ENST00000531551 TRPV5Q9NQA5 729 aa18.08■□□□□ 0.49
CTSB-222ENST00000531551 CDC23Q9UJX2 597 aa18.08■□□□□ 0.49
CTSB-222ENST00000531551 TTC7AQ9ULT0 858 aaPredicted RBP18.08■□□□□ 0.49
CTSB-222ENST00000531551 ARHGAP42A6NI28 874 aa18.07■□□□□ 0.48
CTSB-222ENST00000531551 SPECC1L-ADORA2AF8WAN1 911 aa18.07■□□□□ 0.48
CTSB-222ENST00000531551 KRIT1O00522 736 aa18.07■□□□□ 0.48
CTSB-222ENST00000531551 PABPC1P11940 636 aaKnown RBP18.07■□□□□ 0.48
CTSB-222ENST00000531551 OPRD1P41143 372 aa18.07■□□□□ 0.48
CTSB-222ENST00000531551 OXCT1P55809 520 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms