RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 TPX2Q9ULW0 747 aaKnown RBP11.72□□□□□ -0.53
VPS28-214ENST00000531032 CEP83Q9Y592 693 aa11.72□□□□□ -0.53
VPS28-214ENST00000531032 ATRXP46100 2492 aa11.72□□□□□ -0.53
VPS28-214ENST00000531032 ADAMTS20P59510 1910 aa11.72□□□□□ -0.53
VPS28-214ENST00000531032 APC2O95996 2303 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 ACACAQ13085 2346 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 A0A1B0GVM2 712 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 A0A1W2PR77 199 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 TCAF2A6NFQ2 919 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 GOLGA8CPA6NN73 597 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 BECN2A8MW95 431 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 FGFR1OPO95684 399 aaKnown RBP11.71□□□□□ -0.53
VPS28-214ENST00000531032 WNT1P04628 370 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 GLI1P08151 1106 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 SLC2A3P11169 496 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 GOT1P17174 413 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 MZF1P28698 734 aaPredicted RBP11.71□□□□□ -0.53
VPS28-214ENST00000531032 PSMD8P48556 350 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 STK19P49842 368 aaPredicted RBP11.71□□□□□ -0.53
VPS28-214ENST00000531032 VASPP50552 380 aaPredicted RBP11.71□□□□□ -0.53
VPS28-214ENST00000531032 PLK1P53350 603 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 IL9RQ01113 521 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 SULT2A1Q06520 285 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 TAF5Q15542 800 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 SMAD1Q15797 465 aaKnown RBP11.71□□□□□ -0.53
VPS28-214ENST00000531032 SMYD5Q6GMV2 418 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 GJB7Q6PEY0 223 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 SND1Q7KZF4 910 aaKnown RBP eCLIP11.71□□□□□ -0.53
VPS28-214ENST00000531032 CCAR2Q8N163 923 aaKnown RBP11.71□□□□□ -0.53
VPS28-214ENST00000531032 STK40Q8N2I9 435 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 MDM1Q8TC05 714 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 FRS2Q8WU20 508 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 FAM131CQ96AQ9 280 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 SKA1Q96BD8 255 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 CPXM1Q96SM3 734 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 ELF4Q99607 663 aaPredicted RBP11.71□□□□□ -0.53
VPS28-214ENST00000531032 CRACR2AQ9BSW2 395 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 ASNSD1Q9NWL6 643 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 SLC12A6Q9UHW9 1150 aa11.71□□□□□ -0.53
VPS28-214ENST00000531032 WNT9AO14904 365 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 YKT6O15498 198 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 LATO43561 262 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 HSF2BPO75031 334 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 GADD45BO75293 160 aaPredicted RBP11.7□□□□□ -0.54
VPS28-214ENST00000531032 VAV1P15498 845 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 PDGFRAP16234 1089 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 ABCB4P21439 1286 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 CD38P28907 300 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 CCR1P32246 355 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 DRD3P35462 400 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 ANP32AP39687 249 aaKnown RBP11.7□□□□□ -0.54
VPS28-214ENST00000531032 NNMTP40261 264 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 OXCT1P55809 520 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 CDK17Q00537 523 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 CAMK2BQ13554 666 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 SHBQ15464 509 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 RABGAP1LQ5R372 815 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 CXorf57Q6NSI4 855 aaKnown RBP11.7□□□□□ -0.54
VPS28-214ENST00000531032 FBXL22Q6P050 247 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 CIR1Q86X95 450 aaPredicted RBP11.7□□□□□ -0.54
VPS28-214ENST00000531032 DEFB106AQ8N104 65 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 WDTC1Q8N5D0 677 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 OR14C36Q8NHC7 312 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 SHC3Q92529 594 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 SPAG5Q96R06 1193 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 FAM204AQ9H8W3 233 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 AASDHPPTQ9NRN7 309 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 DDIT4Q9NX09 232 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 APEX2Q9UBZ4 518 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 FTSJ1Q9UET6 329 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 RWDD2AQ9UIY3 292 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 PCDHGC3Q9UN70 934 aa11.7□□□□□ -0.54
VPS28-214ENST00000531032 GTPBP10A4D1E9 387 aaKnown RBP11.69□□□□□ -0.54
VPS28-214ENST00000531032 SLC7A4O43246 635 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 ATP9BO43861 1147 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 IL1BP01584 269 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 SLC9A1P19634 815 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 METAP1P53582 386 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 PPP2CBP62714 309 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 PPP2CAP67775 309 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 APBA1Q02410 837 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 CENPCQ03188 943 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 MTA1Q13330 715 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 EFHC1Q5JVL4 640 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 PRAMEF14Q5SWL7 426 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 OLFML1Q6UWY5 402 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 MARCH9Q86YJ5 346 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 GATAD2AQ86YP4 633 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 SAP25Q8TEE9 199 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 ALG14Q96F25 216 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 SERAC1Q96JX3 654 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 PPP1R13BQ96KQ4 1090 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 PPP1R9BQ96SB3 815 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 KDM4CQ9H3R0 1056 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 GDF3Q9NR23 364 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 RAXQ9Y2V3 346 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 PCDHGA1Q9Y5H4 931 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 OR51B4Q9Y5P0 310 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 LOC400499M0QZD8 3231 aa11.69□□□□□ -0.54
VPS28-214ENST00000531032 BAHCC1Q9P281 2608 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms