RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 TBC1D3KA0A087X1G2 549 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 TBC1D3FA6NER0 549 aaPredicted RBP16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 EIF4E1BA6NMX2 242 aaKnown RBP16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 TBC1D3LB9A6J9 549 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 CBX4O00257 560 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 ENC1O14682 589 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 PAPSS1O43252 624 aaPredicted RBP16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 BNIP3LO60238 219 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 RFPL3O75679 317 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 DKK1O94907 266 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 WNT1P04628 370 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 TBC1D3HP0C7X1 549 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 C7P10643 843 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 VAV1P15498 845 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 GOT1P17174 413 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 CCR5P51681 352 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 PPP2CBP62714 309 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 YWHAZP63104 245 aaKnown RBP16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 PPP2CAP67775 309 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 CDK17Q00537 523 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 PDCLQ13371 301 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 BECN1Q14457 450 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 ARID5BQ14865 1188 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 POM121L1PQ3SYA9 428 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 ACCSLQ4AC99 568 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 TTC39BQ5VTQ0 682 aaPredicted RBP16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 TBC1D3GQ6DHY5 549 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 TBC1D3CQ6IPX1 549 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 CREBRFQ8IUR6 639 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 TBC1D3Q8IZP1 549 aaPredicted RBP16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 CCAR2Q8N163 923 aaKnown RBP16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 PDCD7Q8N8D1 485 aaKnown RBP16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 RPRD1AQ96P16 312 aaPredicted RBP16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 SLC25A13Q9UJS0 675 aa16.32■□□□□ 0.2
CHMP4A-204ENST00000530996 A0A1B0GVM2 712 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 TCAF2A6NFQ2 919 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 PLK4O00444 970 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 LDOC1O95751 146 aaPredicted RBP16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 SLC2A3P11169 496 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 EPHA8P29322 1005 aaPredicted RBP16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 MAT2AP31153 395 aaKnown RBP16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 CLDN6P56747 220 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 PITX1P78337 314 aaPredicted RBP16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 CENPCQ03188 943 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 SULT2A1Q06520 285 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 DNAJC3Q13217 504 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 KCNJ12Q14500 433 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 SMAD1Q15797 465 aaKnown RBP16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 PASD1Q8IV76 773 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 TRIM59Q8IWR1 403 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 EID2Q8N6I1 236 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 OR8D1Q8WZ84 308 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 NXPE2Q96DL1 559 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 SPAG5Q96R06 1193 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 THAP9Q9H5L6 903 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 EBF2Q9HAK2 575 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 CYTH4Q9UIA0 394 aa16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 TPX2Q9ULW0 747 aaKnown RBP16.31■□□□□ 0.2
CHMP4A-204ENST00000530996 KCNU1A8MYU2 1149 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 C1QTNF3-AMACRE9PGA6 284 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 RTN2O75298 545 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 GRAP2O75791 330 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 ZNF18P17022 549 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 CCR1P32246 355 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 RPL34P49207 117 aaKnown RBP16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 OXCT1P55809 520 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 NME3Q13232 169 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 SLC12A1Q13621 1099 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 MEA1Q16626 185 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 ARHGAP44Q17R89 818 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 C6orf118Q5T5N4 469 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 NAPEPLDQ6IQ20 393 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 BEND5Q7L4P6 421 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 TMPRSS12Q86WS5 348 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 STK32AQ8WU08 396 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 PTPRN2Q92932 1015 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 FAM129BQ96TA1 746 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 CRACR2AQ9BSW2 395 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 SRRTQ9BXP5 876 aaKnown RBP16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 SLC4A5Q9BY07 1137 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 SYNCQ9H7C4 482 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 ACP6Q9NPH0 428 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 DKK4Q9UBT3 224 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 VPS28Q9UK41 221 aa16.3■□□□□ 0.2
CHMP4A-204ENST00000530996 BAHCC1Q9P281 2608 aa16.29■□□□□ 0.2
CHMP4A-204ENST00000530996 PPP1R3GB7ZBB8 358 aa16.29■□□□□ 0.2
CHMP4A-204ENST00000530996 WNT9AO14904 365 aa16.29■□□□□ 0.2
CHMP4A-204ENST00000530996 FGFR1OPO95684 399 aaKnown RBP16.29■□□□□ 0.2
CHMP4A-204ENST00000530996 JUPP14923 745 aa16.29■□□□□ 0.2
CHMP4A-204ENST00000530996 GGCXP38435 758 aa16.29■□□□□ 0.2
CHMP4A-204ENST00000530996 ABCG1P45844 678 aa16.29■□□□□ 0.2
CHMP4A-204ENST00000530996 METAP1P53582 386 aa16.29■□□□□ 0.2
CHMP4A-204ENST00000530996 NXPH1P58417 271 aa16.29■□□□□ 0.2
CHMP4A-204ENST00000530996 MORC3Q14149 939 aa16.29■□□□□ 0.2
CHMP4A-204ENST00000530996 TAF5Q15542 800 aa16.29■□□□□ 0.2
CHMP4A-204ENST00000530996 FAM46CQ5VWP2 391 aa16.29■□□□□ 0.2
CHMP4A-204ENST00000530996 GJB7Q6PEY0 223 aa16.29■□□□□ 0.2
CHMP4A-204ENST00000530996 Q6ZVU0 165 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms