RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 FAM25AB3EWG3 89 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 FAM25CB3EWG5 89 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 FAM25GB3EWG6 89 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 TRDMT1O14717 391 aaKnown RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 ATG7O95352 703 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 FAM58BPP0C7Q3 252 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 OR56A5P0C7T3 313 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 GLRA2P23416 452 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 EIF4BP23588 611 aaKnown RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 NUP107P57740 925 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 SGCGQ13326 291 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 RETSATQ6NUM9 610 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 PALB2Q86YC2 1186 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 HIC2Q96JB3 615 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 SENP8Q96LD8 212 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 NSMCE2Q96MF7 247 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 CDRT15Q96T59 188 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 RIBC2Q9H4K1 309 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 APOC4-APOC2K7ER74 178 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 DYRK3O43781 588 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 CNOT3O75175 753 aaKnown RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 PIAS1O75925 651 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 IGSF6O95976 241 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 APOC2P02655 101 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 FCGR1AP12314 374 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 SP100P23497 879 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 AXLP30530 894 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 CD86P42081 329 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 CACNA2D1P54289 1103 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 BCL2L1Q07817 233 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 NEDD8Q15843 81 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 TRMT5Q32P41 509 aaKnown RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 KHDRBS2Q5VWX1 349 aaKnown RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 ETNPPLQ8TBG4 499 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 EPS8L1Q8TE68 723 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 ALG9Q9H6U8 611 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 BPIFA1Q9NP55 256 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 AVENQ9NQS1 362 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 CATSPERZQ9NTU4 200 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 PCDHA11Q9Y5I1 949 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 EPHB6O15197 1021 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 RTN3O95197 1032 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 PTPN1P18031 435 aaKnown RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 CDK16Q00536 496 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 EVX2Q03828 476 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 ELAVL2Q12926 359 aaKnown RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 MEA1Q16626 185 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 MIIPQ5JXC2 388 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 DGKKQ5KSL6 1271 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 CELF3Q5SZQ8 465 aaKnown RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 RAP1GAP2Q684P5 730 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 KIAA0319LQ8IZA0 1049 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 NETO2Q8NC67 525 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 PRKD2Q9BZL6 878 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 FBXO6Q9NRD1 293 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 RRN3Q9NYV6 651 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 ATP6V1HQ9UI12 483 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 RAB21Q9UL25 225 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 A0A087X1B8 175 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 CXCL11O14625 94 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 TBC1D12O60347 775 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 GJB1P08034 283 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 CYP3A4P08684 503 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 GRK4P32298 578 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 RRP1BQ14684 758 aaKnown RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 DDR2Q16832 855 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 SHROOM1Q2M3G4 852 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 FGD3Q5JSP0 725 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 GRIN3AQ8TCU5 1115 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 HAS1Q92839 578 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 LPPQ93052 612 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 CENPTQ96BT3 561 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 PWWP2AQ96N64 755 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 DEPDC7Q96QD5 511 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 ABHD16BQ9H3Z7 469 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 PAIP2BQ9ULR5 123 aaKnown RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 MROH2AA6NES4 1674 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 PSMD12O00232 456 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 PTPRAP18433 802 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 CSNK2BP67870 215 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 SLC34A1Q06495 639 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 ZC3H12AQ5D1E8 599 aaKnown RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 PPM1LQ5SGD2 360 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 LPCAT2Q7L5N7 544 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 FAM126BQ8IXS8 530 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 EID3Q8N140 333 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 IDI2Q9BXS1 227 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 WDR41Q9HAD4 459 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 KCNMB3Q9NPA1 279 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 OR12D3Q9UGF7 316 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 A0A0B4J269 797 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 FAM220BPB1ANY3 271 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 PSMD10O75832 226 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 PIGNO95427 931 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 TRUB2O95900 331 aaKnown RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 PROCP04070 461 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 SERPINH1P50454 418 aaKnown RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 TGM3Q08188 693 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 MAD2L1Q13257 205 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms