RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 SEMA3BQ13214 749 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 NME3Q13232 169 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 SLC14A1Q13336 389 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 NUMA1Q14980 2115 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 SYCP1Q15431 976 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 DCAF12L1Q5VU92 463 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 TAF3Q5VWG9 929 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 TRNP1Q6NT89 227 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 SND1Q7KZF4 910 aaKnown RBP eCLIP12.42□□□□□ -0.425e-6■■■■□ 22.5
COPB1-206ENST00000529210 PIP4P1Q86T03 277 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 DEFB119Q8N690 84 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 FRS2Q8WU20 508 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 PTPRN2Q92932 1015 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 FAM131CQ96AQ9 280 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 RPRD1AQ96P16 312 aaPredicted RBP12.42□□□□□ -0.42
COPB1-206ENST00000529210 SPAG5Q96R06 1193 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 HAPLN3Q96S86 360 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 TBCBQ99426 244 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 BTBD1Q9H0C5 482 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 TKTL2Q9H0I9 626 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 RETREG1Q9H6L5 497 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 ANLNQ9NQW6 1124 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 ADAMTS9Q9P2N4 1935 aa12.42□□□□□ -0.42
COPB1-206ENST00000529210 PCNX2A6NKB5 2137 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 SYNJ2BP-COX16A0A087WUM0 186 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.41□□□□□ -0.42
COPB1-206ENST00000529210 ATP9BO43861 1147 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 RNASEH1O60930 286 aaKnown RBP12.41□□□□□ -0.42
COPB1-206ENST00000529210 CFIP05156 583 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 MZF1P28698 734 aaPredicted RBP12.41□□□□□ -0.42
COPB1-206ENST00000529210 ACSL1P33121 698 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 CTSOP43234 321 aaPredicted RBP12.41□□□□□ -0.42
COPB1-206ENST00000529210 SULT1E1P49888 294 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 SHC2P98077 582 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 NRG1Q02297 640 aaPredicted RBP12.41□□□□□ -0.42
COPB1-206ENST00000529210 PTP4A2Q12974 167 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 ZNF177Q13360 481 aaPredicted RBP12.41□□□□□ -0.42
COPB1-206ENST00000529210 ELAVL3Q14576 367 aaKnown RBP12.41□□□□□ -0.42
COPB1-206ENST00000529210 NAA35Q5VZE5 725 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 C14orf80Q86SX3 495 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 SETD3Q86TU7 594 aaPredicted RBP12.41□□□□□ -0.42
COPB1-206ENST00000529210 RGL4Q8IZJ4 473 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 NEK11Q8NG66 645 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 SLC20A1Q8WUM9 679 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 CPA5Q8WXQ8 436 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 FAM129BQ96TA1 746 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 FEM1AQ9BSK4 669 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 NAT10Q9H0A0 1025 aaKnown RBP12.41□□□□□ -0.42
COPB1-206ENST00000529210 PABPC3Q9H361 631 aaKnown RBP12.41□□□□□ -0.42
COPB1-206ENST00000529210 NLRC4Q9NPP4 1024 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 COX16Q9P0S2 106 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 ZNF212Q9UDV6 495 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 SLCO3A1Q9UIG8 710 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 VANGL2Q9ULK5 521 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 FZD4Q9ULV1 537 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 TPX2Q9ULW0 747 aaKnown RBP12.41□□□□□ -0.42
COPB1-206ENST00000529210 MYO6Q9UM54 1294 aa12.41□□□□□ -0.42
COPB1-206ENST00000529210 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.41□□□□□ -0.42
COPB1-206ENST00000529210 CHD5Q8TDI0 1954 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 CXorf51AA0A1B0GTR3 108 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 MEI4A8MW99 385 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 TTC34A8MYJ7 566 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 ALOX15BO15296 676 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 OPHN1O60890 802 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 SEMA4FO95754 770 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 ADH1BP00325 375 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 ZNF883P0CG24 379 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 PDGFRAP16234 1089 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 CDK11BP21127 795 aaKnown RBP12.4□□□□□ -0.42
COPB1-206ENST00000529210 RDXP35241 583 aaKnown RBP12.4□□□□□ -0.42
COPB1-206ENST00000529210 NNMTP40261 264 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 PTPN9P43378 593 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 IRAK1P51617 712 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 RNASE9P60153 205 aaKnown RBP12.4□□□□□ -0.42
COPB1-206ENST00000529210 UBXN1Q04323 297 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 CST6Q15828 149 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 N4BP2L1Q5TBK1 243 aaPredicted RBP12.4□□□□□ -0.42
COPB1-206ENST00000529210 RNF219Q5W0B1 726 aaPredicted RBP12.4□□□□□ -0.42
COPB1-206ENST00000529210 STRADAQ7RTN6 431 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 CIR1Q86X95 450 aaPredicted RBP12.4□□□□□ -0.42
COPB1-206ENST00000529210 PHF13Q86YI8 300 aaPredicted RBP12.4□□□□□ -0.42
COPB1-206ENST00000529210 MINDY1Q8N5J2 469 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 OR52K2Q8NGK3 314 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 CENPIQ92674 756 aaPredicted RBP12.4□□□□□ -0.42
COPB1-206ENST00000529210 C6orf106Q9H6K1 298 aaPredicted RBP12.4□□□□□ -0.42
COPB1-206ENST00000529210 PPARGC1AQ9UBK2 798 aaKnown RBP12.4□□□□□ -0.42
COPB1-206ENST00000529210 HS3ST2Q9Y278 367 aa12.4□□□□□ -0.42
COPB1-206ENST00000529210 TPRP12270 2363 aaKnown RBP12.39□□□□□ -0.43
COPB1-206ENST00000529210 C2CD4BA6NLJ0 364 aa12.39□□□□□ -0.43
COPB1-206ENST00000529210 BCAT2O15382 392 aaPredicted RBP12.39□□□□□ -0.43
COPB1-206ENST00000529210 ATP1A3P13637 1013 aa12.39□□□□□ -0.43
COPB1-206ENST00000529210 C5AR1P21730 350 aa12.39□□□□□ -0.43
COPB1-206ENST00000529210 MAOBP27338 520 aa12.39□□□□□ -0.43
COPB1-206ENST00000529210 STK19P49842 368 aaPredicted RBP12.39□□□□□ -0.43
COPB1-206ENST00000529210 NOVA1P51513 510 aaKnown RBP12.39□□□□□ -0.43
COPB1-206ENST00000529210 ATXN3P54252 364 aaPredicted RBP12.39□□□□□ -0.43
COPB1-206ENST00000529210 GRIK2Q13002 908 aa12.39□□□□□ -0.43
COPB1-206ENST00000529210 HNRNPDQ14103 355 aaKnown RBP12.39□□□□□ -0.43
COPB1-206ENST00000529210 CLEC16AQ2KHT3 1053 aa12.39□□□□□ -0.43
COPB1-206ENST00000529210 ANO6Q4KMQ2 910 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms