RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 RBP3P10745 1247 aa25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 COILP38432 576 aaPredicted RBP25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 FCHO2Q0JRZ9 810 aa25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 ZNF177Q13360 481 aaPredicted RBP25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 DHCR24Q15392 516 aa25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 LEXMQ3ZCV2 418 aa25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 AFMIDQ63HM1 303 aa25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 C12orf50Q8NA57 414 aaPredicted RBP25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 OTUB2Q96DC9 234 aa25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 BBS2Q9BXC9 721 aa25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 H0Y626 953 aa25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 CCDC188H7C350 402 aa25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 PSMC3P17980 439 aa25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 SERPINB6P35237 376 aa25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 IFNAR2P48551 515 aa25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 NRLP54845 237 aa25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 OASLQ15646 514 aaKnown RBP25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 CXorf57Q6NSI4 855 aaKnown RBP25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 CHST9Q7L1S5 443 aa25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 MAFAQ8NHW3 353 aaPredicted RBP25.36■■□□□ 1.65
LDLRAD3-203ENST00000528989 H7C0C1 242 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 LUC7L3O95232 432 aaKnown RBP25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 CYP17A1P05093 508 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 ACVRL1P37023 503 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 ATP5OP48047 213 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 HTR4Q13639 388 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 SMAD2Q15796 467 aaKnown RBP25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 TTC39BQ5VTQ0 682 aaPredicted RBP25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 PTCRAQ6ISU1 281 aaPredicted RBP25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 PRUNE1Q86TP1 453 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 LZTR1Q8N653 840 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 NAT16Q8N8M0 369 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 CCNYQ8ND76 341 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 TTC8Q8TAM2 541 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 HMCESQ96FZ2 354 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 HINFPQ9BQA5 517 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 THG1LQ9NWX6 298 aaKnown RBP25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 LIMD1Q9UGP4 676 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 ZNF148Q9UQR1 794 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 TBC1D30Q9Y2I9 924 aa25.35■■□□□ 1.65
LDLRAD3-203ENST00000528989 TYW5A2RUC4 315 aaKnown RBP25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 ANHXE9PGG2 379 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 MCF2LO15068 1137 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 CYBBP04839 570 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 TYRP14679 529 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 MAPKAPK2P49137 400 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 PAPOLAP51003 745 aaKnown RBP25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 MPP7Q5T2T1 576 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 MFN1Q8IWA4 741 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 CCDC105Q8IYK2 499 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 NKD2Q969F2 451 aaPredicted RBP25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 E2F7Q96AV8 911 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 PHF7Q9BWX1 381 aaPredicted RBP25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 HPS4Q9NQG7 708 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 HOMER3Q9NSC5 361 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 VCANP13611 3396 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 RASA4BC9J798 803 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 RASA4O43374 803 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 RAMP2O60895 175 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 ECI2O75521 394 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 PENKP01210 267 aaPredicted RBP25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 GDF10P55107 478 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 GALNT2Q10471 571 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 CDH18Q13634 790 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 POLD3Q15054 466 aaPredicted RBP25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 DARS2Q6PI48 645 aaKnown RBP25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 OR7D4Q8NG98 312 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 GTSE1Q9NYZ3 720 aa25.34■■□□□ 1.65
LDLRAD3-203ENST00000528989 IL9P15248 144 aa25.33■■□□□ 1.65
LDLRAD3-203ENST00000528989 RBL1P28749 1068 aa25.33■■□□□ 1.65
LDLRAD3-203ENST00000528989 GDI1P31150 447 aa25.33■■□□□ 1.65
LDLRAD3-203ENST00000528989 CHRNA3P32297 505 aa25.33■■□□□ 1.65
LDLRAD3-203ENST00000528989 GARSP41250 739 aaKnown RBP25.33■■□□□ 1.65
LDLRAD3-203ENST00000528989 NDST2P52849 883 aa25.33■■□□□ 1.65
LDLRAD3-203ENST00000528989 DRICH1Q6PGQ1 229 aaPredicted RBP25.33■■□□□ 1.65
LDLRAD3-203ENST00000528989 KIAA1958Q8N8K9 716 aa25.33■■□□□ 1.65
LDLRAD3-203ENST00000528989 CCDC114Q96M63 670 aa25.33■■□□□ 1.65
LDLRAD3-203ENST00000528989 LRRC1Q9BTT6 524 aa25.33■■□□□ 1.65
LDLRAD3-203ENST00000528989 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.33■■□□□ 1.65
LDLRAD3-203ENST00000528989 V9GYY5 206 aaPredicted RBP25.33■■□□□ 1.65
LDLRAD3-203ENST00000528989 TRIM24O15164 1050 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 MZF1P28698 734 aaPredicted RBP25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 GNA12Q03113 381 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 AP1B1Q10567 949 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 PDK1Q15118 436 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 C6orf118Q5T5N4 469 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 ASTLQ6HA08 431 aaPredicted RBP25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 MTSS1LQ765P7 747 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 SETD3Q86TU7 594 aaPredicted RBP25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 YAF2Q8IY57 180 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 MMGT1Q8N4V1 131 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 GLIS1Q8NBF1 620 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 TRMT61BQ9BVS5 477 aaKnown RBP25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 USP29Q9HBJ7 922 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 RAD51CO43502 376 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 RHOCP08134 193 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 ETS1P14921 441 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 VAV1P15498 845 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 RNF219Q5W0B1 726 aaPredicted RBP25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 RNF43Q68DV7 783 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms