RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 NPAS4Q8IUM7 802 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 CTAGE3PQ8IX95 158 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 PTPRN2Q92932 1015 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 APOPT1Q96IL0 206 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 C1orf74Q96LT6 269 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 DEFB118Q96PH6 123 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 VN1R3Q9BXE9 311 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 KDM4CQ9H3R0 1056 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 TRHDEQ9UKU6 1024 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 LAMA2P24043 3122 aaKnown RBP13.84□□□□□ -0.19
SEC16B-208ENST00000528461 TBX18O95935 607 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 HTR7P34969 479 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 MARK2Q7KZI7 788 aaKnown RBP13.84□□□□□ -0.19
SEC16B-208ENST00000528461 OTUD6BQ8N6M0 293 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 ZNF75CPQ92670 426 aaPredicted RBP13.84□□□□□ -0.19
SEC16B-208ENST00000528461 APBB2Q92870 758 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 PAIP2Q9BPZ3 127 aaKnown RBP13.84□□□□□ -0.19
SEC16B-208ENST00000528461 SAMD15Q9P1V8 674 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 WASH4PA8MWX3 477 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 E9PAM4 449 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 MTSS1O43312 755 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 ZNF189O75820 626 aaPredicted RBP13.84□□□□□ -0.19
SEC16B-208ENST00000528461 FSBPO95073 299 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 JCHAINP01591 159 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 SNRPAP09012 282 aaKnown RBP13.84□□□□□ -0.19
SEC16B-208ENST00000528461 PGAM1P18669 254 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 CCNCP24863 283 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 BMPR2Q13873 1038 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 RWDD4Q6NW29 188 aaKnown RBP13.84□□□□□ -0.19
SEC16B-208ENST00000528461 ANKRD33Q7Z3H0 272 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 SPATA21Q7Z572 469 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 VAT1Q99536 393 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 IL12RB2Q99665 862 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 NSRP1Q9H0G5 558 aaKnown RBP13.84□□□□□ -0.19
SEC16B-208ENST00000528461 FBXO44Q9H4M3 255 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 PRDM5Q9NQX1 630 aaPredicted RBP13.84□□□□□ -0.19
SEC16B-208ENST00000528461 ABCF3Q9NUQ8 709 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 PSAT1Q9Y617 370 aa13.84□□□□□ -0.19
SEC16B-208ENST00000528461 ADAM12O43184 909 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 PQBP1O60828 265 aaKnown RBP13.83□□□□□ -0.2
SEC16B-208ENST00000528461 EDF1O60869 148 aaKnown RBP13.83□□□□□ -0.2
SEC16B-208ENST00000528461 PEX11BO96011 259 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 MAGEA9P43362 315 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 ZNF280DQ6N043 979 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 FAM47EQ6ZV65 393 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 OTOP3Q7RTS5 596 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 TMEM135Q86UB9 458 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 C10orf67Q8IYJ2 551 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 RNF168Q8IYW5 571 aaPredicted RBP13.83□□□□□ -0.2
SEC16B-208ENST00000528461 ABI1Q8IZP0 508 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 TBC1D31Q96DN5 1066 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 SERPINB11Q96P15 392 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 TMEM175Q9BSA9 504 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.83□□□□□ -0.2
SEC16B-208ENST00000528461 MKS1Q9NXB0 559 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 MPP6Q9NZW5 540 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 ZNF212Q9UDV6 495 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 STARD13Q9Y3M8 1113 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 ZCWPW2A0A1B0GU75 182 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 FGF10O15520 208 aaPredicted RBP13.83□□□□□ -0.2
SEC16B-208ENST00000528461 MYCP01106 439 aaPredicted RBP13.83□□□□□ -0.2
SEC16B-208ENST00000528461 IGLV3-27P01718 113 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 ZDHHC11BP0C7U3 371 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 LIG3P49916 1009 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 CES3Q6UWW8 571 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 TIFABQ6ZNK6 161 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 ANKS4BQ8N8V4 417 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 SPATA17Q96L03 361 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 RMDN2Q96LZ7 410 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 FERMT1Q9BQL6 677 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 VPS11Q9H270 941 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 IL1RAPL1Q9NZN1 696 aa13.83□□□□□ -0.2
SEC16B-208ENST00000528461 HAPLN1P10915 354 aaPredicted RBP13.82□□□□□ -0.2
SEC16B-208ENST00000528461 ALADP13716 330 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 TUBP50607 506 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 CCL23P55773 120 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 ACTN3Q08043 901 aaPredicted RBP13.82□□□□□ -0.2
SEC16B-208ENST00000528461 GALNTL6Q49A17 601 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.82□□□□□ -0.2
SEC16B-208ENST00000528461 RTL3Q8N8U3 475 aaKnown RBP13.82□□□□□ -0.2
SEC16B-208ENST00000528461 CLIC5Q9NZA1 410 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 PHTF1Q9UMS5 762 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 IKBKGQ9Y6K9 419 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 IGLV3-10A0A075B6K4 115 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 LPXNO60711 386 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 ATF6P18850 670 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 MS4A13Q5J8X5 152 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 RNF187Q5TA31 235 aaPredicted RBP13.82□□□□□ -0.2
SEC16B-208ENST00000528461 CES4AQ5XG92 561 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 CCNJLQ8IV13 435 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 PITPNM3Q9BZ71 974 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 TBKBP1A7MCY6 615 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 ERI2A8K979 691 aaKnown RBP13.82□□□□□ -0.2
SEC16B-208ENST00000528461 ARHGEF6Q15052 776 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 CERCAMQ5T4B2 595 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 PRSS55Q6UWB4 352 aaPredicted RBP13.82□□□□□ -0.2
SEC16B-208ENST00000528461 FAM43BQ6ZT52 329 aaPredicted RBP13.82□□□□□ -0.2
SEC16B-208ENST00000528461 TRPM8Q7Z2W7 1104 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 CHSY1Q86X52 802 aa13.82□□□□□ -0.2
SEC16B-208ENST00000528461 MYEOVQ96EZ4 313 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms