RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 WDCPQ9H6R7 721 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 GAREM1Q9H706 876 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 PLCB1Q9NQ66 1216 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.63□□□□□ -0.07
CAPN1-212ENST00000527887 SLCO3A1Q9UIG8 710 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 ASCC3Q8N3C0 2202 aaKnown RBP14.63□□□□□ -0.07
CAPN1-212ENST00000527887 PCDH15Q96QU1 1955 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 FRYQ5TBA9 3013 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 SYNJ2BP-COX16A0A087WUM0 186 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 SPAARA0A1B0GVQ0 90 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 SYCE3A1L190 88 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 FAM221BA6H8Z2 402 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 TTC34A8MYJ7 566 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 M0QYT0 321 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 PES1O00541 588 aaKnown RBP14.62□□□□□ -0.07
CAPN1-212ENST00000527887 GRAP2O75791 330 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 FSBPO95073 299 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 TPM2P07951 284 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 UCHL3P15374 230 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 SLC8A1P32418 973 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 RACK1P63244 317 aaKnown RBP14.62□□□□□ -0.07
CAPN1-212ENST00000527887 KCNMA1Q12791 1236 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 NME3Q13232 169 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 RAPGEF1Q13905 1077 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 HLA-BQ31612 363 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 UNQ6494/PRO21346Q6UXR6 183 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 ARCQ7LC44 396 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 DSG4Q86SJ6 1040 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 ERICH1Q86X53 443 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 ZNF677Q86XU0 584 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 MMAAQ8IVH4 418 aaKnown RBP14.62□□□□□ -0.07
CAPN1-212ENST00000527887 OR2I1PQ8NGU4 316 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 OR2T34Q8NGX1 318 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 PTPRN2Q92932 1015 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 C1orf74Q96LT6 269 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 SPAG5Q96R06 1193 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 FAM129BQ96TA1 746 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 OMDQ99983 421 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 SCNM1Q9BWG6 230 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 NAA15Q9BXJ9 866 aaKnown RBP14.62□□□□□ -0.07
CAPN1-212ENST00000527887 KDM4CQ9H3R0 1056 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 TM9SF3Q9HD45 589 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 TM7SF3Q9NS93 570 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 ARHGEF38Q9NXL2 777 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 COX16Q9P0S2 106 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 AJAP1Q9UKB5 411 aaPredicted RBP14.62□□□□□ -0.07
CAPN1-212ENST00000527887 TBC1D30Q9Y2I9 924 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 MSRB2Q9Y3D2 182 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 HS3ST4Q9Y661 456 aa14.62□□□□□ -0.07
CAPN1-212ENST00000527887 USP24Q9UPU5 2620 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 A0A1B0GVT2 93 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 A0A1W2PPC4 97 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 MID1O15344 667 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 FLRT2O43155 660 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 PDGFRAP16234 1089 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 GOT1P17174 413 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 CTSOP43234 321 aaPredicted RBP14.61□□□□□ -0.07
CAPN1-212ENST00000527887 CSNK1EP49674 416 aaKnown RBP14.61□□□□□ -0.07
CAPN1-212ENST00000527887 CXCR3P49682 368 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 CCR5P51681 352 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 GALCP54803 685 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 CDH4P55283 916 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 BNC1Q01954 994 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 SLC25A52Q3SY17 297 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 FAM46CQ5VWP2 391 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 CXorf57Q6NSI4 855 aaKnown RBP14.61□□□□□ -0.07
CAPN1-212ENST00000527887 KDF1Q8NAX2 398 aaPredicted RBP14.61□□□□□ -0.07
CAPN1-212ENST00000527887 IGSF8Q969P0 613 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 ALG14Q96F25 216 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 RPL10LQ96L21 214 aaKnown RBP14.61□□□□□ -0.07
CAPN1-212ENST00000527887 CDC6Q99741 560 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 FEM1AQ9BSK4 669 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 FUCA2Q9BTY2 467 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 NEUROG2Q9H2A3 272 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 MTG2Q9H4K7 406 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 SAMSN1Q9NSI8 373 aaKnown RBP14.61□□□□□ -0.07
CAPN1-212ENST00000527887 SLC25A13Q9UJS0 675 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 VANGL2Q9ULK5 521 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 APOBEC2Q9Y235 224 aaKnown RBP14.61□□□□□ -0.07
CAPN1-212ENST00000527887 ANKRD6Q9Y2G4 727 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 FHOD1Q9Y613 1164 aa14.61□□□□□ -0.07
CAPN1-212ENST00000527887 MAP1BP46821 2468 aaKnown RBP14.61□□□□□ -0.07
CAPN1-212ENST00000527887 PCNX2A6NKB5 2137 aa14.6□□□□□ -0.07
CAPN1-212ENST00000527887 A0A1W2PP55 124 aa14.6□□□□□ -0.07
CAPN1-212ENST00000527887 C10orf142B7Z368 130 aa14.6□□□□□ -0.07
CAPN1-212ENST00000527887 VILLO15195 856 aa14.6□□□□□ -0.07
CAPN1-212ENST00000527887 ALOX15BO15296 676 aa14.6□□□□□ -0.07
CAPN1-212ENST00000527887 SLC7A4O43246 635 aa14.6□□□□□ -0.07
CAPN1-212ENST00000527887 ATP9BO43861 1147 aa14.6□□□□□ -0.07
CAPN1-212ENST00000527887 CBFA2T3O75081 653 aa14.6□□□□□ -0.07
CAPN1-212ENST00000527887 PAGE1O75459 146 aa14.6□□□□□ -0.07
CAPN1-212ENST00000527887 RNASEH2AO75792 299 aaKnown RBP14.6□□□□□ -0.07
CAPN1-212ENST00000527887 IGHV4-34P06331 123 aa14.6□□□□□ -0.07
CAPN1-212ENST00000527887 PNMA6AP0CW24 399 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-212ENST00000527887 MZF1P28698 734 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-212ENST00000527887 NUDT1P36639 197 aa14.6□□□□□ -0.07
CAPN1-212ENST00000527887 KRT83P78385 493 aa14.6□□□□□ -0.07
CAPN1-212ENST00000527887 DEUP1Q05D60 604 aa14.6□□□□□ -0.07
CAPN1-212ENST00000527887 KIF19Q2TAC6 998 aa14.6□□□□□ -0.07
CAPN1-212ENST00000527887 SASS6Q6UVJ0 657 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms