RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 RSAD1Q9HA92 442 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 VTA1Q9NP79 307 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 KIAA1522Q9P206 1035 aaPredicted RBP12.75□□□□□ -0.37
TSKU-203ENST00000527881 PRR12Q9ULL5 1215 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 MAGED2Q9UNF1 606 aaPredicted RBP12.75□□□□□ -0.37
TSKU-203ENST00000527881 C3orf70A6NLC5 250 aaPredicted RBP12.75□□□□□ -0.37
TSKU-203ENST00000527881 KPNA7A9QM74 516 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 SULT1C4O75897 302 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 MYO1DO94832 1006 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 CHRNGP07510 517 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 F7P08709 466 aaPredicted RBP12.75□□□□□ -0.37
TSKU-203ENST00000527881 ACO1P21399 889 aaKnown RBP12.75□□□□□ -0.37
TSKU-203ENST00000527881 MIPP30301 263 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 TTKP33981 857 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 RAD23AP54725 363 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 PSME3P61289 254 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 TFDP2Q14188 446 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 SEZ6Q53EL9 994 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 MAP4K3Q8IVH8 894 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 SIX5Q8N196 739 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 SGF29Q96ES7 293 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 OLFM1Q99784 485 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 NPLQ9BXD5 320 aaPredicted RBP12.75□□□□□ -0.37
TSKU-203ENST00000527881 TJP2Q9UDY2 1190 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 PCDHB12Q9Y5F1 795 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 TOGARAM1Q9Y4F4 1720 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 A6NL46 340 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 SOCS2O14508 198 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 ENTPD3O75355 529 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 NFIAQ12857 509 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 NFATC3Q12968 1075 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 ZACNQ401N2 412 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 FAM47CQ5HY64 1035 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 SLC10A5Q5PT55 438 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 RC3H1Q5TC82 1133 aaKnown RBP12.74□□□□□ -0.37
TSKU-203ENST00000527881 CES3Q6UWW8 571 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 TERB1Q8NA31 727 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 TRUB1Q8WWH5 349 aaKnown RBP12.74□□□□□ -0.37
TSKU-203ENST00000527881 SCYL1Q96KG9 808 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 PCDH12Q9NPG4 1184 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 CDYLQ9Y232 598 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 FAM159BA6NKW6 160 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 FAM47E-STBD1D6RA91 191 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 TBXAS1P24557 533 aaPredicted RBP12.74□□□□□ -0.37
TSKU-203ENST00000527881 TCF7P36402 384 aaPredicted RBP12.74□□□□□ -0.37
TSKU-203ENST00000527881 GARSP41250 739 aaKnown RBP12.74□□□□□ -0.37
TSKU-203ENST00000527881 NKX2-5P52952 324 aaPredicted RBP12.74□□□□□ -0.37
TSKU-203ENST00000527881 PHKG1Q16816 387 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 GLRA4Q5JXX5 417 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 CHSY3Q70JA7 882 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 ANKRD60Q9BZ19 345 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 NOL6Q9H6R4 1146 aaKnown RBP12.74□□□□□ -0.37
TSKU-203ENST00000527881 KCNH7Q9NS40 1196 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 SMOXQ9NWM0 555 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 GPATCH2LQ9NWQ4 482 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 RBAKQ9NYW8 714 aaPredicted RBP12.74□□□□□ -0.37
TSKU-203ENST00000527881 CNOT11Q9UKZ1 510 aaKnown RBP12.74□□□□□ -0.37
TSKU-203ENST00000527881 USP18Q9UMW8 372 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 ZNF195O14628 629 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 GSRP00390 522 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 CNTFP26441 200 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 CCR10P46092 362 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 SLC25A11Q02978 314 aaKnown RBP12.74□□□□□ -0.37
TSKU-203ENST00000527881 TRIM25Q14258 630 aaKnown RBP12.74□□□□□ -0.37
TSKU-203ENST00000527881 PLCL1Q15111 1095 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 SLC39A4Q6P5W5 647 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 DCLRE1AQ6PJP8 1040 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 GK5Q6ZS86 529 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 FRA10AC1Q70Z53 315 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 PCYOX1LQ8NBM8 494 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 ADI1Q9BV57 179 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 CDH7Q9ULB5 785 aa12.74□□□□□ -0.37
TSKU-203ENST00000527881 CNOT6Q9ULM6 557 aaKnown RBP12.74□□□□□ -0.37
TSKU-203ENST00000527881 ROBO1Q9Y6N7 1651 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 HEATR9A2RTY3 570 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 KCNU1A8MYU2 1149 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 NAT1P18440 290 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 SOX11P35716 441 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 GRIA3P42263 894 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 HARS2P49590 506 aaKnown RBP12.73□□□□□ -0.37
TSKU-203ENST00000527881 TIGD2Q4W5G0 525 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 CADM3Q8N126 398 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 CCNYL1Q8N7R7 359 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 ZNF420Q8TAQ5 688 aaPredicted RBP12.73□□□□□ -0.37
TSKU-203ENST00000527881 ACDQ96AP0 544 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 NRBF2Q96F24 287 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 FBXL20Q96IG2 436 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 CEP170P1Q96L14 293 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 SNX25Q9H3E2 840 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 PKD2L2Q9NZM6 624 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 SFMBT1Q9UHJ3 866 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 AP4E1Q9UPM8 1137 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 PSAT1Q9Y617 370 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 CCDC162PA2VCL2 907 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 ZBBXA8MT70 800 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 ZNF701M0R085 212 aaPredicted RBP12.73□□□□□ -0.37
TSKU-203ENST00000527881 HDAC3O15379 428 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 NOMO1Q15155 1222 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 SMUG1Q53HV7 270 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 NEPROQ6NW34 567 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms