RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 CIR1Q86X95 450 aaPredicted RBP23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 CPXM1Q96SM3 734 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 SYNCQ9H7C4 482 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 FZD4Q9ULV1 537 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 ASPMQ8IZT6 3477 aa23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 ADH1BP00325 375 aa23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 GLI1P08151 1106 aa23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 GOT1P17174 413 aa23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 C5AR1P21730 350 aa23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 MZF1P28698 734 aaPredicted RBP23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 CTSKP43235 329 aa23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 OXCT1P55809 520 aa23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 NME3Q13232 169 aa23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 WDTC1Q8N5D0 677 aa23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 BAHD1Q8TBE0 780 aaPredicted RBP23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 PTPRN2Q92932 1015 aa23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 SLC6A18Q96N87 628 aa23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 RPRD1AQ96P16 312 aaPredicted RBP23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 ORAI3Q9BRQ5 295 aa23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 CCDC86Q9H6F5 360 aaKnown RBP23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 ADAMTS1Q9UHI8 967 aa23.08■■□□□ 1.29
TRAPPC4-208ENST00000527680 ITIH6Q6UXX5 1313 aa23.08■■□□□ 1.28
TRAPPC4-208ENST00000527680 FAM208BQ5VWN6 2430 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 TBC1D3DA0A087WVF3 549 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 TBC1D3IA0A087WXS9 549 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 TBC1D3EA0A087X179 549 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 TBC1D3KA0A087X1G2 549 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 TBC1D3FA6NER0 549 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 TBC1D3LB9A6J9 549 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 VILLO15195 856 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 TNFSF14O43557 240 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 PCDHGA12O60330 932 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 HSF2BPO75031 334 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 TBC1D3HP0C7X1 549 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 PON1P27169 355 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 ZNF177Q13360 481 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 TTC39BQ5VTQ0 682 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 TBC1D3GQ6DHY5 549 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 TBC1D3CQ6IPX1 549 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 C11orf57Q6ZUT1 292 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 PROSER1Q86XN7 944 aa23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 TBC1D3Q8IZP1 549 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC4-208ENST00000527680 PLXNB3Q9ULL4 1909 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 A0A1B0GVM2 712 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 TCAF2A6NFQ2 919 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 TAF4O00268 1085 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 CD38P28907 300 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 ELAVL3Q14576 367 aaKnown RBP23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 INAVAQ3KP66 663 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 FBXL22Q6P050 247 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 AADATQ8N5Z0 425 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 SHC3Q92529 594 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 SLC2A13Q96QE2 648 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 PRMT1Q99873 361 aaKnown RBP23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 PDCL3Q9H2J4 239 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 EBF2Q9HAK2 575 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 ASNSD1Q9NWL6 643 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 SLC25A13Q9UJS0 675 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 DNAJC12Q9UKB3 198 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 VANGL2Q9ULK5 521 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 PCDHGC3Q9UN70 934 aa23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 GOLGA4Q13439 2230 aaKnown RBP23.06■■□□□ 1.28
TRAPPC4-208ENST00000527680 PTPRBP23467 1997 aa23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 VAV1P15498 845 aa23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 ZNF18P17022 549 aa23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 CCR5P51681 352 aa23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 PLK1P53350 603 aa23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 UBE2HP62256 183 aa23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 EIF4EBP2Q13542 120 aaPredicted RBP23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 AUHQ13825 339 aaKnown RBP23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 KCNJ12Q14500 433 aa23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 FAM183BPQ6ZVS7 135 aa23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 TMPRSS7Q7RTY8 843 aa23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 C1orf131Q8NDD1 294 aaKnown RBP23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 SERAC1Q96JX3 654 aa23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 SIK2Q9H0K1 926 aa23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 TOR4AQ9NXH8 423 aa23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 LHX6Q9UPM6 363 aa23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 PLXNA2O75051 1894 aa23.05■■□□□ 1.28
TRAPPC4-208ENST00000527680 GTPBP10A4D1E9 387 aaKnown RBP23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 M0QYT0 321 aa23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 ADPRHP54922 357 aa23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 RNASE9P60153 205 aaKnown RBP23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 SLC6A3Q01959 620 aa23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 CENPCQ03188 943 aa23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 MTA1Q13330 715 aa23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 SLC45A4Q5BKX6 768 aa23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 DSG4Q86SJ6 1040 aa23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 PRPF39Q86UA1 669 aaKnown RBP23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 GATAD2AQ86YP4 633 aa23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 GALNT15Q8N3T1 639 aa23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 MLKLQ8NB16 471 aa23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 OR8D1Q8WZ84 308 aa23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 SPAG5Q96R06 1193 aa23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 ELF4Q99607 663 aaPredicted RBP23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 FEM1AQ9BSK4 669 aa23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 FTSJ1Q9UET6 329 aa23.04■■□□□ 1.28
TRAPPC4-208ENST00000527680 CACNA1GO43497 2377 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 368.4 ms