RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 CROTQ9UKG9 612 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 NUDT5Q9UKK9 219 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 E2F8A0AVK6 867 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 ZBTB5O15062 677 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 KDM4BO94953 1096 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 INHAP05111 366 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 PFKMP08237 780 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 PRG2P13727 222 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 ERCC2P18074 760 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 ST8SIA6P61647 398 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 USP46P62068 366 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 FAM76BQ5HYJ3 339 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 TCHHL1Q5QJ38 904 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-216ENST00000527467 MROH9Q5TGP6 573 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 MTDHQ86UE4 582 aaKnown RBP7.37□□□□□ -1.23
CTNND1-216ENST00000527467 JAMLQ86YT9 394 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 SRBD1Q8N5C6 995 aaKnown RBP7.37□□□□□ -1.23
CTNND1-216ENST00000527467 ACTRT2Q8TDY3 377 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 ERMAPQ96PL5 475 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-216ENST00000527467 MTG1Q9BT17 334 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-216ENST00000527467 ISCUQ9H1K1 167 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 TRIM10Q9UDY6 481 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 ERGIC3Q9Y282 383 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 ADGRB1O14514 1584 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 SH3D21A4FU49 640 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 LOC110117498-PIK3R3F6TDL0 507 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 CD2BP2O95400 341 aaKnown RBP7.37□□□□□ -1.23
CTNND1-216ENST00000527467 SYDE2Q5VT97 1194 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 PDXDC2PQ6P474 469 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 RIPOR1Q6ZS17 1223 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 BRSK2Q8IWQ3 736 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 HS6ST3Q8IZP7 471 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 TDRD5Q8NAT2 981 aaKnown RBP7.37□□□□□ -1.23
CTNND1-216ENST00000527467 PCDH19Q8TAB3 1148 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 MAFIPQ8WZ33 124 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 DLG3Q92796 817 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 TMEM120AQ9BXJ8 343 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 CRISPLD1Q9H336 500 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 SH3GLB2Q9NR46 395 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 RASSF1Q9NS23 344 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 OGDHLQ9ULD0 1010 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 PPEF2O14830 753 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 UBDO15205 165 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 DHX15O43143 795 aaKnown RBP7.37□□□□□ -1.23
CTNND1-216ENST00000527467 SIN3BO75182 1162 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 RTN2O75298 545 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 CYP7B1O75881 506 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 UBOX5O94941 541 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 CSPG5O95196 566 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 MMP1P03956 469 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 FGFR2P21802 821 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 GRK5P34947 590 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 FLT3LGP49771 235 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 GPC3P51654 580 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 PEX3P56589 373 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 BACE1P56817 501 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 ZNF280AP59817 542 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-216ENST00000527467 IKBKEQ14164 716 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 CLEC16AQ2KHT3 1053 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 PUS10Q3MIT2 529 aaKnown RBP7.37□□□□□ -1.23
CTNND1-216ENST00000527467 OGFRL1Q5TC84 451 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-216ENST00000527467 EGFLAMQ63HQ2 1017 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 ZNF746Q6NUN9 644 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-216ENST00000527467 RNF145Q96MT1 663 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 TRIT1Q9H3H1 467 aaKnown RBP7.37□□□□□ -1.23
CTNND1-216ENST00000527467 GOLPH3Q9H4A6 298 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 ELL3Q9HB65 397 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-216ENST00000527467 COPRSQ9NQ92 184 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 RNF146Q9NTX7 359 aa7.37□□□□□ -1.23
CTNND1-216ENST00000527467 MAFKO60675 156 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ATP6V1G1O75348 118 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 BMP10O95393 424 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 GNAO1P09471 354 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 MYL4P12829 197 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ATP5F1P24539 256 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 MNDAP41218 407 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ACADSBP45954 432 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 TGM3Q08188 693 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 AGKQ53H12 422 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 NAPEPLDQ6IQ20 393 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 PRR23CQ6ZRP0 262 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 FAM43BQ6ZT52 329 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 KCNK18Q7Z418 384 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 C10orf107Q8IVU9 208 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 REXO1L1PQ8IX06 675 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 TRMT2AQ8IZ69 625 aaKnown RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 NDNQ99608 321 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 BTBD10Q9BSF8 475 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 CINPQ9BW66 212 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ACAT2Q9BWD1 397 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 TMEM39BQ9GZU3 492 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 PCDH18Q9HCL0 1135 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 CLN6Q9NWW5 311 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 TOR4AQ9NXH8 423 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 NKIRAS2Q9NYR9 191 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 MED11Q9P086 117 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 POLLQ9UGP5 575 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 GGA2Q9UJY4 613 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 RNF112Q9ULX5 631 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms