RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 DARS2Q6PI48 645 aaKnown RBP19.32■□□□□ 0.68
SMPD1-203ENST00000527275 ZC3H18Q86VM9 953 aaKnown RBP19.32■□□□□ 0.68
SMPD1-203ENST00000527275 DENND1CQ8IV53 801 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 ZCCHC9Q8N567 271 aaKnown RBP19.32■□□□□ 0.68
SMPD1-203ENST00000527275 ATP6V0D2Q8N8Y2 350 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 UHMK1Q8TAS1 419 aaKnown RBP19.32■□□□□ 0.68
SMPD1-203ENST00000527275 GAS2L1Q99501 681 aaPredicted RBP19.32■□□□□ 0.68
SMPD1-203ENST00000527275 LRRC4CQ9HCJ2 640 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 NDC80O14777 642 aa19.31■□□□□ 0.68
SMPD1-203ENST00000527275 SCAMP3O14828 347 aaKnown RBP19.31■□□□□ 0.68
SMPD1-203ENST00000527275 CORO1AP31146 461 aaKnown RBP19.31■□□□□ 0.68
SMPD1-203ENST00000527275 STIP1P31948 543 aaKnown RBP19.31■□□□□ 0.68
SMPD1-203ENST00000527275 MORF4L2Q15014 288 aa19.31■□□□□ 0.68
SMPD1-203ENST00000527275 DNAJC21Q5F1R6 531 aaKnown RBP19.31■□□□□ 0.68
SMPD1-203ENST00000527275 MS4A13Q5J8X5 152 aa19.31■□□□□ 0.68
SMPD1-203ENST00000527275 AGBL2Q5U5Z8 902 aa19.31■□□□□ 0.68
SMPD1-203ENST00000527275 HOOK3Q86VS8 718 aa19.31■□□□□ 0.68
SMPD1-203ENST00000527275 FAM71DQ8N9W8 422 aa19.31■□□□□ 0.68
SMPD1-203ENST00000527275 C1orf74Q96LT6 269 aa19.31■□□□□ 0.68
SMPD1-203ENST00000527275 CCL26Q9Y258 94 aa19.31■□□□□ 0.68
SMPD1-203ENST00000527275 H7C0C1 242 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 EEF2KO00418 725 aaKnown RBP19.3■□□□□ 0.68
SMPD1-203ENST00000527275 RPL22P35268 128 aaKnown RBP19.3■□□□□ 0.68
SMPD1-203ENST00000527275 ATP5OP48047 213 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 RNASEH2BQ5TBB1 312 aaKnown RBP19.3■□□□□ 0.68
SMPD1-203ENST00000527275 CEP128Q6ZU80 1094 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 Q7L0L9 218 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 PCGF5Q86SE9 256 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 EPAS1Q99814 870 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 RCOR3Q9P2K3 495 aaPredicted RBP19.3■□□□□ 0.68
SMPD1-203ENST00000527275 HEY1Q9Y5J3 304 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 CLUHO75153 1309 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 TTC4O95801 387 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 AUHQ13825 339 aaKnown RBP19.3■□□□□ 0.68
SMPD1-203ENST00000527275 NADSYN1Q6IA69 706 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 RFX8Q6ZV50 586 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 B4GALNT4Q76KP1 1039 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 ZNF771Q7L3S4 317 aaPredicted RBP19.3■□□□□ 0.68
SMPD1-203ENST00000527275 S1PR5Q9H228 398 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 VANGL2Q9ULK5 521 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 ARHGAP26Q9UNA1 814 aa19.3■□□□□ 0.68
SMPD1-203ENST00000527275 SOBPA7XYQ1 873 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 H3BRJ5 948 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 GREM1O60565 184 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 ACSL3O95573 720 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 AMPD1P23109 780 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 EPHB2P29323 1055 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 SLC11A2P49281 568 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 TPI1P60174 286 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 KYNUQ16719 465 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 SKIDA1Q1XH10 827 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 ARTNQ5T4W7 220 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 RAP1GAP2Q684P5 730 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 C14orf80Q86SX3 495 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 RELL1Q8IUW5 271 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 RBM15Q96T37 977 aaKnown RBP eCLIP19.29■□□□□ 0.68
SMPD1-203ENST00000527275 TMEM109Q9BVC6 243 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 ARHGEF4Q9NR80 690 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 TDP1Q9NUW8 608 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 AGO1Q9UL18 857 aaKnown RBP19.29■□□□□ 0.68
SMPD1-203ENST00000527275 GOLGA6L7A0A1B0GV03 622 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 TLDC2A0PJX2 215 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 PRAMEF12O95522 483 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 ZFXP17010 805 aaPredicted RBP19.29■□□□□ 0.68
SMPD1-203ENST00000527275 NR1D1P20393 614 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 FSHRP23945 695 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 COL19A1Q14993 1142 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 ATAT1Q5SQI0 421 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 CES5AQ6NT32 575 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 CROCCP2Q86T23 111 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 ARID3BQ8IVW6 561 aaPredicted RBP19.29■□□□□ 0.68
SMPD1-203ENST00000527275 FGF13Q92913 245 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 USP13Q92995 863 aaPredicted RBP19.29■□□□□ 0.68
SMPD1-203ENST00000527275 PABPC5Q96DU9 382 aaKnown RBP19.29■□□□□ 0.68
SMPD1-203ENST00000527275 NINJ2Q9NZG7 142 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 CFAP97Q9P2B7 532 aa19.29■□□□□ 0.68
SMPD1-203ENST00000527275 NOVA2Q9UNW9 492 aaKnown RBP19.29■□□□□ 0.68
SMPD1-203ENST00000527275 E9PAM4 449 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 ACSL4O60488 711 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 HCAR3P49019 387 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 SKOR1P84550 965 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 MTA1Q13330 715 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 DPYSQ14117 519 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 FAM133BQ5BKY9 247 aaKnown RBP19.28■□□□□ 0.68
SMPD1-203ENST00000527275 C6orf118Q5T5N4 469 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 EMC10Q5UCC4 262 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 MANEALQ5VSG8 457 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 RWDD4Q6NW29 188 aaKnown RBP19.28■□□□□ 0.68
SMPD1-203ENST00000527275 KDM7AQ6ZMT4 941 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 NPAS3Q8IXF0 933 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 PRMT1Q99873 361 aaKnown RBP19.28■□□□□ 0.68
SMPD1-203ENST00000527275 ETNK2Q9NVF9 386 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 ZMYM5Q9UJ78 669 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 SHOC2Q9UQ13 582 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 NEU3Q9UQ49 428 aa19.28■□□□□ 0.68
SMPD1-203ENST00000527275 FARP1Q9Y4F1 1045 aaPredicted RBP19.28■□□□□ 0.68
SMPD1-203ENST00000527275 LEFTY2O00292 366 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 SLC6A4P31645 630 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 MAGEA4P43358 317 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 DMTNQ08495 405 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms