RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 IWS1Q96ST2 819 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 NAP1L4Q99733 375 aaKnown RBP4.95□□□□□ -1.62
USP48-211ENST00000526044 PXMP2Q9NR77 195 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 PIH1D1Q9NWS0 290 aaKnown RBP4.95□□□□□ -1.62
USP48-211ENST00000526044 COL20A1Q9P218 1284 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 GJD2Q9UKL4 321 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 CFAP45Q9UL16 551 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 RAD54BQ9Y620 910 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 PLXNB2O15031 1838 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 PLXNA1Q9UIW2 1896 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 DOCK3Q8IZD9 2030 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 MYH7BA7E2Y1 1941 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 TCHHQ07283 1943 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 ASB14A6NK59 587 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 F5H697 171 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 M0QYG6 137 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 TRIAP1O43715 76 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 PEX1O43933 1283 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 CCNT1O60563 726 aaKnown RBP4.94□□□□□ -1.62
USP48-211ENST00000526044 STAM2O75886 525 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 BAG4O95429 457 aaKnown RBP4.94□□□□□ -1.62
USP48-211ENST00000526044 CYP3A4P08684 503 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 MYBP10242 640 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 CYP2B6P20813 491 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 CCND2P30279 289 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 ADRA1BP35368 520 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 RGS2P41220 211 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 TRAPPC10P48553 1259 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 TOB1P50616 345 aaPredicted RBP4.94□□□□□ -1.62
USP48-211ENST00000526044 UBXN2AP68543 259 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 CNTN2Q02246 1040 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 CEBPZQ03701 1054 aaKnown RBP4.94□□□□□ -1.62
USP48-211ENST00000526044 GRB14Q14449 540 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 PGM5Q15124 567 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 STXBP2Q15833 593 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 EARS2Q5JPH6 523 aaKnown RBP4.94□□□□□ -1.62
USP48-211ENST00000526044 ANO1Q5XXA6 986 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 TAF2Q6P1X5 1199 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 XRRA1Q6P2D8 792 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 FAM173BQ6P4H8 233 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 VWA1Q6PCB0 445 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 NPNTQ6UXI9 565 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 WDR75Q8IWA0 830 aaKnown RBP4.94□□□□□ -1.62
USP48-211ENST00000526044 FAM46DQ8NEK8 389 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 SLC30A5Q8TAD4 765 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 CD99L2Q8TCZ2 262 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 HEPHQ9BQS7 1158 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 TMEM60Q9H2L4 133 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 CHST12Q9NRB3 414 aa4.94□□□□□ -1.62
USP48-211ENST00000526044 MRPS18AQ9NVS2 196 aaKnown RBP4.94□□□□□ -1.62
USP48-211ENST00000526044 GEMIN8Q9NWZ8 242 aaKnown RBP4.94□□□□□ -1.62
USP48-211ENST00000526044 RBBP6Q7Z6E9 1792 aaKnown RBP4.93□□□□□ -1.62
USP48-211ENST00000526044 CYP3A7-CYP3A51PA0A087WV96 503 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 A0A0B4J269 797 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 A0A1W2PPL8 197 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 YY2O15391 372 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 EDIL3O43854 480 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 DNAJB5O75953 348 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 LDHAP00338 332 aaKnown RBP4.93□□□□□ -1.62
USP48-211ENST00000526044 THP07101 528 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 HOXC6P09630 235 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 PIM1P11309 404 aaPredicted RBP4.93□□□□□ -1.62
USP48-211ENST00000526044 GCFC2P16383 781 aaKnown RBP4.93□□□□□ -1.62
USP48-211ENST00000526044 ITGALP20701 1170 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 BDNFP23560 247 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 CYP3A7P24462 503 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 CTGFP29279 349 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 CIITAP33076 1130 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 FOLR3P41439 243 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 NDUFV1P49821 464 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 ALDH5A1P51649 535 aaPredicted RBP4.93□□□□□ -1.62
USP48-211ENST00000526044 PRMT2P55345 433 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 COL10A1Q03692 680 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 TUBB3Q13509 450 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 STK38Q15208 465 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 ERCC6LQ2NKX8 1250 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 GFOD2Q3B7J2 385 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 CEP55Q53EZ4 464 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 MOXD1Q6UVY6 613 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 OLFML1Q6UWY5 402 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 NIPA1Q7RTP0 329 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 PLA2G4DQ86XP0 818 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 CELF5Q8N6W0 485 aaKnown RBP4.93□□□□□ -1.62
USP48-211ENST00000526044 CYP2W1Q8TAV3 490 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 CRYGNQ8WXF5 182 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 SOCS4Q8WXH5 440 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 USP6NLQ92738 828 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 MRGPRX1Q96LB2 322 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 NT5C1BQ96P26 610 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 OSBPL9Q96SU4 736 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 MXRA8Q9BRK3 442 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 B3GNT5Q9BYG0 378 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 ARHGAP39Q9C0H5 1083 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 SMOC2Q9H3U7 446 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 FAM204AQ9H8W3 233 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 LRIT1Q9P2V4 623 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 DDX25Q9UHL0 483 aaKnown RBP4.93□□□□□ -1.62
USP48-211ENST00000526044 RCOR1Q9UKL0 485 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 GABRQQ9UN88 632 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 MED16Q9Y2X0 877 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms