RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 ZNF252P-AS1Q0IIN9 211 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 CAMK2GQ13555 558 aaPredicted RBP13.32□□□□□ -0.28
CTSB-209ENST00000525315 SLC18A3Q16572 532 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 USP39Q53GS9 565 aaKnown RBP13.32□□□□□ -0.28
CTSB-209ENST00000525315 SCYL2Q6P3W7 929 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 SERPINA13PQ6UXR4 307 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 SETD3Q86TU7 594 aaPredicted RBP13.32□□□□□ -0.28
CTSB-209ENST00000525315 METTL3Q86U44 580 aaKnown RBP13.32□□□□□ -0.28
CTSB-209ENST00000525315 CNGA4Q8IV77 575 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 HMGB4Q8WW32 186 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 CHP1Q99653 195 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 ANP32EQ9BTT0 268 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 TPSD1Q9BZJ3 242 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 TRIM7Q9C029 511 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 ZYG11BQ9C0D3 744 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 THAP2Q9H0W7 228 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 MPP6Q9NZW5 540 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 MYO1AQ9UBC5 1043 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 FZD10Q9ULW2 581 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 ERVW-1Q9UQF0 538 aa13.32□□□□□ -0.28
CTSB-209ENST00000525315 ZNF292O60281 2723 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 FAM72CH0Y354 149 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 ZBTB24O43167 697 aaPredicted RBP13.31□□□□□ -0.28
CTSB-209ENST00000525315 SYNCRIPO60506 623 aaKnown RBP13.31□□□□□ -0.28
CTSB-209ENST00000525315 EPHX1P07099 455 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 HLA-EP13747 358 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 DESP17661 470 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 NDUFV2P19404 249 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 PSMA2P25787 234 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 L1CAMP32004 1257 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 P2RY2P41231 377 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 CTSOP43234 321 aaPredicted RBP13.31□□□□□ -0.28
CTSB-209ENST00000525315 COPAP53621 1224 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 GFPT1Q06210 699 aaPredicted RBP13.31□□□□□ -0.28
CTSB-209ENST00000525315 SULT2A1Q06520 285 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 BYSLQ13895 437 aaKnown RBP13.31□□□□□ -0.28
CTSB-209ENST00000525315 STARD3Q14849 445 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 ACAP1Q15027 740 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 MAP7D1Q3KQU3 841 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 FNDC3BQ53EP0 1204 aaKnown RBP13.31□□□□□ -0.28
CTSB-209ENST00000525315 FAM72AQ5TYM5 149 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 RNF219Q5W0B1 726 aaPredicted RBP13.31□□□□□ -0.28
CTSB-209ENST00000525315 FAM72DQ6L9T8 149 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 FAM72BQ86X60 149 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 PGBD3Q8N328 593 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 TC2NQ8N9U0 490 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 MRGPRX1Q96LB2 322 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 NCAPGQ9BPX3 1015 aa13.31□□□□□ -0.28
CTSB-209ENST00000525315 NHEJ1Q9H9Q4 299 aaPredicted RBP13.31□□□□□ -0.28
CTSB-209ENST00000525315 BCCIPQ9P287 314 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTSB-209ENST00000525315 SMG5Q9UPR3 1016 aaKnown RBP13.31□□□□□ -0.28
CTSB-209ENST00000525315 PTPRZ1P23471 2315 aaPredicted RBP13.3□□□□□ -0.28
CTSB-209ENST00000525315 EP300Q09472 2414 aaPredicted RBP13.3□□□□□ -0.28
CTSB-209ENST00000525315 TNRC6BQ9UPQ9 1833 aaKnown RBP13.3□□□□□ -0.28
CTSB-209ENST00000525315 ILVBLA1L0T0 632 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 DCLK1O15075 740 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 RNF8O76064 485 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 LRIG2O94898 1065 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 RHOQP17081 205 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 OR1E1P30953 314 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 ST8SIA6P61647 398 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 SEMA3BQ13214 749 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 PLK5Q496M5 336 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 C6orf118Q5T5N4 469 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 LAIR1Q6GTX8 287 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 ZNF783Q6ZMS7 281 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 PRR23BQ6ZRT6 265 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 CEP68Q76N32 757 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 KBTBD6Q86V97 674 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 C11orf74Q86VG3 221 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 NLRP14Q86W24 1093 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 TMPRSS6Q8IU80 811 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 PYROXD2Q8N2H3 581 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 FAM160A2Q8N612 972 aaPredicted RBP13.3□□□□□ -0.28
CTSB-209ENST00000525315 ARHGEF26Q96DR7 871 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 PSMB7Q99436 277 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 MKRN2Q9H000 416 aaKnown RBP13.3□□□□□ -0.28
CTSB-209ENST00000525315 DUSP15Q9H1R2 295 aaPredicted RBP13.3□□□□□ -0.28
CTSB-209ENST00000525315 PRSS16Q9NQE7 514 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 ITM2CQ9NQX7 267 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 TMEM248Q9NWD8 314 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 SLCO3A1Q9UIG8 710 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 RAB23Q9ULC3 237 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 NEU3Q9UQ49 428 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 INVSQ9Y283 1065 aa13.3□□□□□ -0.28
CTSB-209ENST00000525315 GPR179Q6PRD1 2367 aa13.29□□□□□ -0.28
CTSB-209ENST00000525315 TARSL2A2RTX5 802 aaKnown RBP13.29□□□□□ -0.28
CTSB-209ENST00000525315 ZNF217O75362 1048 aa13.29□□□□□ -0.28
CTSB-209ENST00000525315 RHOCP08134 193 aa13.29□□□□□ -0.28
CTSB-209ENST00000525315 MIPP30301 263 aa13.29□□□□□ -0.28
CTSB-209ENST00000525315 PCK1P35558 622 aa13.29□□□□□ -0.28
CTSB-209ENST00000525315 PI4KAP42356 2102 aa13.29□□□□□ -0.28
CTSB-209ENST00000525315 PIGHQ14442 188 aaPredicted RBP13.29□□□□□ -0.28
CTSB-209ENST00000525315 HNRNPA1L2Q32P51 320 aaKnown RBP13.29□□□□□ -0.28
CTSB-209ENST00000525315 EFHC2Q5JST6 749 aa13.29□□□□□ -0.28
CTSB-209ENST00000525315 ERMARDQ5T6L9 678 aa13.29□□□□□ -0.28
CTSB-209ENST00000525315 CYP4V2Q6ZWL3 525 aaPredicted RBP13.29□□□□□ -0.28
CTSB-209ENST00000525315 TFAP2DQ7Z6R9 452 aa13.29□□□□□ -0.28
CTSB-209ENST00000525315 PSTKQ8IV42 348 aaKnown RBP13.29□□□□□ -0.28
CTSB-209ENST00000525315 FRMD1Q8N878 549 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms