RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 CSF2RAP15509 400 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 OR1E1P30953 314 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 ELF1P32519 619 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 PAPOLAP51003 745 aaKnown RBP12.03□□□□□ -0.48
PTPRK-216ENST00000524481 PLD1Q13393 1074 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 PRPSAP1Q14558 356 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 GPNMBQ14956 572 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 CDHR3Q6ZTQ4 885 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 LIMS2Q7Z4I7 341 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 TBC1D1Q86TI0 1168 aaPredicted RBP12.03□□□□□ -0.48
PTPRK-216ENST00000524481 DENND1CQ8IV53 801 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 MICAL1Q8TDZ2 1067 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 BCL7CQ8WUZ0 217 aaPredicted RBP12.03□□□□□ -0.48
PTPRK-216ENST00000524481 CDKL2Q92772 493 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 FICDQ9BVA6 458 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 SP110Q9HB58 689 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 ZNF358Q9NW07 568 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 IPO11Q9UI26 975 aaKnown RBP12.03□□□□□ -0.48
PTPRK-216ENST00000524481 SHROOM3Q8TF72 1996 aa12.03□□□□□ -0.48
PTPRK-216ENST00000524481 DCLK1O15075 740 aa12.02□□□□□ -0.48
PTPRK-216ENST00000524481 OPHN1O60890 802 aa12.02□□□□□ -0.48
PTPRK-216ENST00000524481 GJB3O75712 270 aa12.02□□□□□ -0.48
PTPRK-216ENST00000524481 DGKIO75912 1065 aa12.02□□□□□ -0.48
PTPRK-216ENST00000524481 RPLP2P05387 115 aaKnown RBP12.02□□□□□ -0.48
PTPRK-216ENST00000524481 SNRPAP09012 282 aaKnown RBP12.02□□□□□ -0.48
PTPRK-216ENST00000524481 IKBKEQ14164 716 aa12.02□□□□□ -0.48
PTPRK-216ENST00000524481 PARP6Q2NL67 630 aa12.02□□□□□ -0.48
PTPRK-216ENST00000524481 RAB41Q5JT25 222 aa12.02□□□□□ -0.48
PTPRK-216ENST00000524481 SPATA21Q7Z572 469 aa12.02□□□□□ -0.48
PTPRK-216ENST00000524481 RPAINQ86UA6 219 aa12.02□□□□□ -0.48
PTPRK-216ENST00000524481 GSDMBQ8TAX9 411 aa12.02□□□□□ -0.48
PTPRK-216ENST00000524481 DCAKDQ8WVC6 231 aa12.02□□□□□ -0.48
PTPRK-216ENST00000524481 ZNF317Q96PQ6 595 aaPredicted RBP12.02□□□□□ -0.48
PTPRK-216ENST00000524481 SHCBP1LQ9BZQ2 653 aa12.02□□□□□ -0.48
PTPRK-216ENST00000524481 IARS2Q9NSE4 1012 aaKnown RBP12.02□□□□□ -0.48
PTPRK-216ENST00000524481 PLK2Q9NYY3 685 aa12.02□□□□□ -0.48
PTPRK-216ENST00000524481 SLC24A2Q9UI40 661 aa12.02□□□□□ -0.48
PTPRK-216ENST00000524481 NDC80O14777 642 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 KRT38O76015 456 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 SUN1O94901 812 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 POLBP06746 335 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 RAG1P15918 1043 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 GJA1P17302 382 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 GLRBP48167 497 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 DPYSQ14117 519 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 DLG2Q15700 870 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 TEX44Q53QW1 395 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 TRAF7Q6Q0C0 670 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 PSTKQ8IV42 348 aaKnown RBP12.02□□□□□ -0.49
PTPRK-216ENST00000524481 OR6P1Q8NGX9 317 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 CKAP2Q8WWK9 683 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 NT5C3BQ969T7 300 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 CASD1Q96PB1 797 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 CSNK1G1Q9HCP0 422 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 XAB2Q9HCS7 855 aaKnown RBP12.02□□□□□ -0.49
PTPRK-216ENST00000524481 USP3Q9Y6I4 520 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 MTMR11A4FU01 709 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 VAPBO95292 243 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 KCNA4P22459 653 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 CTBP1Q13363 440 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 XRCC4Q13426 336 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 BHLHA9Q7RTU4 235 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 STRA8Q7Z7C7 330 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 NPAS4Q8IUM7 802 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 TNS4Q8IZW8 715 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 LGI2Q8N0V4 545 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 CNTD1Q8N815 330 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 PSMG2Q969U7 264 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 TBC1D31Q96DN5 1066 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 SRPK1Q96SB4 655 aaKnown RBP12.02□□□□□ -0.49
PTPRK-216ENST00000524481 YME1L1Q96TA2 773 aa12.02□□□□□ -0.49
PTPRK-216ENST00000524481 GJB5O95377 273 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 CYP11A1P05108 521 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 ABHD2P08910 425 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 HAPLN1P10915 354 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-216ENST00000524481 TAC1P20366 129 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 FDFT1P37268 417 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 DSC1Q08554 894 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 PLEKHG4Q58EX7 1191 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 TTC39BQ5VTQ0 682 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-216ENST00000524481 PM20D1Q6GTS8 502 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 ADGRD1Q6QNK2 874 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 LDB1Q86U70 411 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-216ENST00000524481 SGF29Q96ES7 293 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 FBXO44Q9H4M3 255 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 CATSPERBQ9H7T0 1116 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 TLR8Q9NR97 1041 aaKnown RBP12.01□□□□□ -0.49
PTPRK-216ENST00000524481 G3BP2Q9UN86 482 aaKnown RBP12.01□□□□□ -0.49
PTPRK-216ENST00000524481 CASP8AP2Q9UKL3 1982 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 KCNU1A8MYU2 1149 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 PRKCGP05129 697 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 TYMPP19971 482 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 RPS24P62847 133 aaKnown RBP12.01□□□□□ -0.49
PTPRK-216ENST00000524481 DEFB103AP81534 67 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 ZNF534Q76KX8 674 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 SLC44A1Q8WWI5 657 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 ZNF75CPQ92670 426 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-216ENST00000524481 PTPRN2Q92932 1015 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 ATP2A3Q93084 1043 aa12.01□□□□□ -0.49
PTPRK-216ENST00000524481 OXNAD1Q96HP4 312 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms