RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 NR1H4Q96RI1 486 aaPredicted RBP8.05□□□□□ -1.12
SPIDR-223ENST00000524033 LRFN3Q9BTN0 628 aa8.05□□□□□ -1.12
SPIDR-223ENST00000524033 MSTO1Q9BUK6 570 aa8.05□□□□□ -1.12
SPIDR-223ENST00000524033 TARS2Q9BW92 718 aaKnown RBP8.05□□□□□ -1.12
SPIDR-223ENST00000524033 CCDC106Q9BWC9 280 aa8.05□□□□□ -1.12
SPIDR-223ENST00000524033 NIFKQ9BYG3 293 aaKnown RBP8.05□□□□□ -1.12
SPIDR-223ENST00000524033 FRMD8Q9BZ67 464 aaPredicted RBP8.05□□□□□ -1.12
SPIDR-223ENST00000524033 NMUR2Q9GZQ4 415 aa8.05□□□□□ -1.12
SPIDR-223ENST00000524033 SDCBP2Q9H190 292 aa8.05□□□□□ -1.12
SPIDR-223ENST00000524033 VCXQ9H320 206 aa8.05□□□□□ -1.12
SPIDR-223ENST00000524033 POPDC2Q9HBU9 364 aa8.05□□□□□ -1.12
SPIDR-223ENST00000524033 TMEM161AQ9NX61 479 aa8.05□□□□□ -1.12
SPIDR-223ENST00000524033 ZDHHC7Q9NXF8 308 aa8.05□□□□□ -1.12
SPIDR-223ENST00000524033 SCHIP1Q9P0W5 487 aaPredicted RBP8.05□□□□□ -1.12
SPIDR-223ENST00000524033 PDP2Q9P2J9 529 aa8.05□□□□□ -1.12
SPIDR-223ENST00000524033 XPO7Q9UIA9 1087 aaKnown RBP8.05□□□□□ -1.12
SPIDR-223ENST00000524033 DCTN4Q9UJW0 460 aa8.05□□□□□ -1.12
SPIDR-223ENST00000524033 ANGPTL2Q9UKU9 493 aa8.05□□□□□ -1.12
SPIDR-223ENST00000524033 CHMP2BQ9UQN3 213 aa8.05□□□□□ -1.12
SPIDR-223ENST00000524033 TET1Q8NFU7 2136 aa8.05□□□□□ -1.12
SPIDR-223ENST00000524033 FNDC1Q4ZHG4 1894 aaPredicted RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 TANC1Q9C0D5 1861 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 A0A0G2JND7 137 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 TCRBV9S1A1TA0A576 114 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 WDR91A4D1P6 747 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 CFAP69A5D8W1 941 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 MAGEA13PA6NCF6 341 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 ENO4A6NNW6 628 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 CDK2AP1O14519 115 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 CAPN9O14815 690 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 GYG2O15488 501 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 LINC01565O15544 149 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 BUD23O43709 281 aaKnown RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 TM7SF2O76062 418 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 TRUB2O95900 331 aaKnown RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 CST3P01034 146 aaPredicted RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 IFNB1P01574 187 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 MYL2P10916 166 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 AMPD1P23109 780 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 PSMA2P25787 234 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 CRABP2P29373 138 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 WEE1P30291 646 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 L1CAMP32004 1257 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 RFC1P35251 1148 aaPredicted RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 IRS1P35568 1242 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 ASPAP45381 313 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 GABRB2P47870 512 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 NRIP1P48552 1158 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 PAPOLAP51003 745 aaKnown RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 MYL6P60660 151 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 PSMA6P60900 246 aaKnown RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 RPL26P61254 145 aaKnown RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 BTKQ06187 659 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 TUBB3Q13509 450 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 CAPSQ13938 189 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 DPYSL3Q14195 570 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 RCN2Q14257 317 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 DSC3Q14574 896 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 ACAP1Q15027 740 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 ZRSR2Q15696 482 aaKnown RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 SMAD2Q15796 467 aaKnown RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 TBCCQ15814 346 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 MTERF2Q49AM1 385 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 TTC39BQ5VTQ0 682 aaPredicted RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 DCUN1D2Q6PH85 259 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 SLC30A9Q6PML9 568 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 ZPBP2Q6X784 338 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 TIFABQ6ZNK6 161 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 CDHR3Q6ZTQ4 885 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 PRPF39Q86UA1 669 aaKnown RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 TMPRSS6Q8IU80 811 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 ADHFE1Q8IWW8 467 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 PDIK1LQ8N165 341 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 EFHBQ8N7U6 833 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 KDF1Q8NAX2 398 aaPredicted RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 SLC4A11Q8NBS3 891 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 RNF169Q8NCN4 708 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 DEPTORQ8TB45 409 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 CCDC110Q8TBZ0 833 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 ZNF668Q96K58 619 aaPredicted RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 FAM111AQ96PZ2 611 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 PEBP4Q96S96 227 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 TSC22D3Q99576 134 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 KLF6Q99612 283 aaPredicted RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 BCO2Q9BYV7 579 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 IMPG2Q9BZV3 1241 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 FAM192AQ9GZU8 254 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 XYLT2Q9H1B5 865 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 C1orf21Q9H246 121 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 ELAC1Q9H777 363 aaKnown RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 C10orf88Q9H8K7 445 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 PIDD1Q9HB75 910 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 CISHQ9NSE2 258 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 DLGAP2Q9P1A6 1054 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 TJP2Q9UDY2 1190 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 TAGLN3Q9UI15 199 aa8.04□□□□□ -1.12
SPIDR-223ENST00000524033 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.04□□□□□ -1.127e-6■■■■■ 27.7
SPIDR-223ENST00000524033 PRRC2BQ5JSZ5 2229 aaKnown RBP8.04□□□□□ -1.12
SPIDR-223ENST00000524033 PDCD11Q14690 1871 aaKnown RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 FAM86C2PA6NEL3 165 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms