RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ADPRHP54922 357 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 SSBP2P81877 361 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 SHC2P98077 582 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 CTXN3Q4LDR2 81 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 FAM57BQ71RH2 274 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 SYT13Q7L8C5 426 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 C2CD5Q86YS7 1000 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 CNGA4Q8IV77 575 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 HERC6Q8IVU3 1022 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 EXD3Q8N9H8 876 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 USP38Q8NB14 1042 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 CSGALNACT1Q8TDX6 532 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 PIGOQ8TEQ8 1089 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 PPM1EQ8WY54 764 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 ARRDC3Q96B67 414 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 SIGLEC11Q96RL6 698 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 SH2D3AQ9BRG2 576 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 PYM1Q9BRP8 204 aaKnown RBP3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 CHODLQ9H9P2 273 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 NOD2Q9HC29 1040 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 TXNRD2Q9NNW7 524 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 MTMR4Q9NYA4 1195 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 KLHL13Q9P2N7 655 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 FEM1BQ9UK73 627 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 FGD5Q6ZNL6 1462 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 ZNF804BA4D1E1 1349 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 SLC22A23A1A5C7 686 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 KCNU1A8MYU2 1149 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 KCNJ18B7U540 433 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 B9A039 149 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 E5RJQ4 531 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 GRM8O00222 908 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 TP73O15350 636 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 PRPF4O43172 522 aaKnown RBP eCLIP3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 CTSAP10619 480 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 PEPDP12955 493 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 PRPH2P23942 346 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 PNPLA4P41247 253 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 STAT1P42224 750 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 ARHGAP25P42331 645 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 CPA2P48052 419 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 ID2Q02363 134 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 CDK18Q07002 472 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 ALKBH1Q13686 389 aaKnown RBP3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 THOC5Q13769 683 aaKnown RBP3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 ANKRD1Q15327 319 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 TRIP6Q15654 476 aaKnown RBP3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 SUPT20HL1Q3ZLR7 823 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 MTX3Q5HYI7 312 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 C10orf76Q5T2E6 689 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 SUGP1Q8IWZ8 645 aaKnown RBP3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 PRSS3P2Q8NHM4 247 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 CLMNQ96JQ2 1002 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 ZNF347Q96SE7 839 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 TUBB6Q9BUF5 446 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 OSBPL5Q9H0X9 879 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 MOV10Q9HCE1 1003 aaKnown RBP3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 MLXIPLQ9NP71 852 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 PAPOLBQ9NRJ5 636 aaKnown RBP3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 SLC22A11Q9NSA0 550 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 SLC8A2Q9UPR5 921 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 TNFSF13BQ9Y275 285 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 DTX4Q9Y2E6 619 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 RRP7AQ9Y3A4 280 aaKnown RBP3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 FANCD2Q9BXW9 1451 aa3.64□□□□□ -1.83
HMGB1P41-201ENST00000520234 RAB3GAP2Q9H2M9 1393 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 TIAM1Q13009 1591 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 FMN1Q68DA7 1419 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 F8W810 466 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 CCNT1O60563 726 aaKnown RBP3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 CNOT3O75175 753 aaKnown RBP3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 HLA-DQA2P01906 255 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 LCKP06239 509 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 PKMP14618 531 aaKnown RBP3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 RXRAP19793 462 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 RPS6KA3P51812 740 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 B4GALNT1Q00973 533 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 PDCLQ13371 301 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 TAF12Q16514 161 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 VWA5B1Q5TIE3 1220 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 ISM2Q6H9L7 571 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 LRIG3Q6UXM1 1119 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 CYP26C1Q6V0L0 522 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 RTL10Q7L3V2 364 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 MDGA2Q7Z553 956 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 TMEM200AQ86VY9 491 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 ARL14EPQ8N8R7 260 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 RILPL2Q969X0 211 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 PPP1R10Q96QC0 940 aaKnown RBP3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 PLEKHA2Q9HB19 425 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 TMEM45AQ9NWC5 275 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 SLC25A13Q9UJS0 675 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 RCE1Q9Y256 329 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 BTBD3Q9Y2F9 522 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 PKP3Q9Y446 797 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 PRDM2Q13029 1718 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 EFCAB5A4FU69 1503 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 RNF123Q5XPI4 1314 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms