RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 DOLKQ9UPQ8 538 aa5.11□□□□□ -1.59
SDCBP-207ENST00000520168 SATB2Q9UPW6 733 aa5.11□□□□□ -1.59
SDCBP-207ENST00000520168 DMTF1Q9Y222 760 aa5.11□□□□□ -1.59
SDCBP-207ENST00000520168 MAN2B2Q9Y2E5 1009 aa5.11□□□□□ -1.59
SDCBP-207ENST00000520168 PCDHA5Q9Y5H7 936 aa5.11□□□□□ -1.59
SDCBP-207ENST00000520168 DOPEY1Q5JWR5 2465 aa5.11□□□□□ -1.59
SDCBP-207ENST00000520168 NPHP3-ACAD11A0A0J9YXS1 232 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 NEMP2A6NFY4 417 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 A8MXQ7 604 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-207ENST00000520168 C10orf142B7Z368 130 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 SIGLEC6O43699 453 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 NRDCO43847 1150 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 RNGTTO60942 597 aaKnown RBP5.1□□□□□ -1.59
SDCBP-207ENST00000520168 UBE4BO95155 1302 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 STAU1O95793 577 aaKnown RBP5.1□□□□□ -1.59
SDCBP-207ENST00000520168 WNT1P04628 370 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 RALAP11233 206 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 CACNA2D1P54289 1103 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 GALCP54803 685 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 NOTCH2Q04721 2471 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 TNP2Q05952 138 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 BNIP3Q12983 259 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 EIF3IQ13347 325 aaKnown RBP5.1□□□□□ -1.59
SDCBP-207ENST00000520168 KIF26BQ2KJY2 2108 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 ISXQ2M1V0 245 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 ZSCAN23Q3MJ62 389 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 LINC00303Q3SY05 128 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 TMEM119Q4V9L6 283 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 C3orf38Q5JPI3 329 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 TMEM164Q5U3C3 297 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 ARL6IP4Q66PJ3 421 aaKnown RBP5.1□□□□□ -1.59
SDCBP-207ENST00000520168 NAPEPLDQ6IQ20 393 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 NCEH1Q6PIU2 408 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 SND1Q7KZF4 910 aaKnown RBP eCLIP5.1□□□□□ -1.593e-10■■■□□ 16.4
SDCBP-207ENST00000520168 DYMQ7RTS9 669 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 ZNF720Q7Z2F6 126 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 FAM35AQ86V20 835 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 WDR49Q8IV35 697 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 GPD1LQ8N335 351 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 KDM1BQ8NB78 822 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 FBXO18Q8NFZ0 1043 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 OR6B3Q8NGW1 331 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 WDR36Q8NI36 951 aaKnown RBP5.1□□□□□ -1.59
SDCBP-207ENST00000520168 SCAMP5Q8TAC9 235 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 DDI1Q8WTU0 396 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 STK32AQ8WU08 396 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 LIN37Q96GY3 246 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-207ENST00000520168 SERAC1Q96JX3 654 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 ACCSQ96QU6 501 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 KCNK16Q96T55 309 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 B3GNT5Q9BYG0 378 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 DOCK9Q9BZ29 2069 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 RSPH9Q9H1X1 276 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-207ENST00000520168 PABPC3Q9H361 631 aaKnown RBP5.1□□□□□ -1.59
SDCBP-207ENST00000520168 KIAA1586Q9HCI6 787 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 CSNK1G1Q9HCP0 422 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 TMEM30AQ9NV96 361 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.1□□□□□ -1.59
SDCBP-207ENST00000520168 GEMIN8Q9NWZ8 242 aaKnown RBP5.1□□□□□ -1.59
SDCBP-207ENST00000520168 FBXL12Q9NXK8 326 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 NLGN3Q9NZ94 848 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 SEPT10Q9P0V9 454 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 KLF15Q9UIH9 416 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 TUBD1Q9UJT1 453 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 ANAPC2Q9UJX6 822 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 ACSL6Q9UKU0 697 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 SCML2Q9UQR0 700 aa5.1□□□□□ -1.59
SDCBP-207ENST00000520168 CSMD1Q96PZ7 3565 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 CELSR1Q9NYQ6 3014 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 A0A1B0GVM2 712 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 FAM47DPA6NHR8 397 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 TISP43B9A030 160 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 TMX2-CTNND1H3BSU7 103 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 TPD52L2O43399 206 aaKnown RBP5.09□□□□□ -1.59
SDCBP-207ENST00000520168 LATO43561 262 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 STC2O76061 302 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 DLDP09622 509 aaKnown RBP5.09□□□□□ -1.59
SDCBP-207ENST00000520168 GAP43P17677 238 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 ATICP31939 592 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 CASRP41180 1078 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 ST8SIA6P61647 398 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 HMGN5P82970 282 aaKnown RBP5.09□□□□□ -1.59
SDCBP-207ENST00000520168 STAT4Q14765 748 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 ME3Q16798 604 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 WDR72Q3MJ13 1102 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 MPPE1Q53F39 396 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 SETMARQ53H47 684 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-207ENST00000520168 RILPL1Q5EBL4 403 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 C10orf120Q5SQS8 335 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 PRAMEF14Q5SWL7 426 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 L1TD1Q5T7N2 865 aaKnown RBP5.09□□□□□ -1.59
SDCBP-207ENST00000520168 RBM44Q6ZP01 1051 aaKnown RBP5.09□□□□□ -1.59
SDCBP-207ENST00000520168 PRPF39Q86UA1 669 aaKnown RBP5.09□□□□□ -1.59
SDCBP-207ENST00000520168 FAM217AQ8IXS0 508 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.09□□□□□ -1.59
SDCBP-207ENST00000520168 SPATA20Q8TB22 786 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 ZNF564Q8TBZ8 553 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-207ENST00000520168 MAPK15Q8TD08 544 aa5.09□□□□□ -1.59
SDCBP-207ENST00000520168 GANCQ8TET4 914 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms