RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 CPXM2Q8N436 756 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 SPEM1Q8N4L4 309 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 CCDC33Q8N5R6 958 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 TERB1Q8NA31 727 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 C12orf50Q8NA57 414 aaPredicted RBP7.83□□□□□ -1.16
SDCBP-206ENST00000519115 TTC13Q8NBP0 860 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 RPLP0P6Q8NHW5 317 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 CCDC26Q8TAB7 109 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 DDI1Q8WTU0 396 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 COG1Q8WTW3 980 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 RXFP2Q8WXD0 754 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 ATOH1Q92858 354 aaPredicted RBP7.83□□□□□ -1.16
SDCBP-206ENST00000519115 SLCO2A1Q92959 643 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 EXOC4Q96A65 974 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 NTAN1Q96AB6 310 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 SLC39A13Q96H72 371 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 PHOX2BQ99453 314 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 ADAM33Q9BZ11 813 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 KCNH6Q9H252 994 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 LRRC19Q9H756 370 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 PRMT8Q9NR22 394 aaPredicted RBP7.83□□□□□ -1.16
SDCBP-206ENST00000519115 DONSONQ9NYP3 566 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 MARK1Q9P0L2 795 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 DEC1Q9P2X7 70 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 CLEC4EQ9ULY5 219 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 DRG1Q9Y295 367 aaKnown RBP7.83□□□□□ -1.16
SDCBP-206ENST00000519115 VPS13AQ96RL7 3174 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 CKAP5Q14008 2032 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 MUC22E2RYF6 1773 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-206ENST00000519115 TBC1D3BA6NDS4 549 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-206ENST00000519115 M0QYT0 321 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 PRPSAP2O60256 369 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 CEP104O60308 925 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 TJP3O95049 919 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 LATS1O95835 1130 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 PENKP01210 267 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-206ENST00000519115 CYBBP04839 570 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 SP9P0CG40 484 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 SLC2A3P11169 496 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 ZFXP17010 805 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-206ENST00000519115 HOXD9P28356 352 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-206ENST00000519115 CHRNA3P32297 505 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 GGCXP38435 758 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 GRIA2P42262 883 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 SLC11A2P49281 568 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 FNTAP49354 379 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 DGKGP49619 791 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 CCR3P51677 355 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 RPS24P62847 133 aaKnown RBP7.82□□□□□ -1.16
SDCBP-206ENST00000519115 SCAPQ12770 1279 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 DHX34Q14147 1143 aaKnown RBP7.82□□□□□ -1.16
SDCBP-206ENST00000519115 TFDP2Q14188 446 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 CCNG2Q16589 344 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 CCDC14Q49A88 953 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 FBXO43Q4G163 708 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 ADGRF1Q5T601 910 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 ERMARDQ5T6L9 678 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 RAP1GAP2Q684P5 730 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 HEATR6Q6AI08 1181 aaKnown RBP7.82□□□□□ -1.16
SDCBP-206ENST00000519115 WDR93Q6P2C0 686 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 BZW1Q7L1Q6 419 aaKnown RBP7.82□□□□□ -1.16
SDCBP-206ENST00000519115 CHSY1Q86X52 802 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 SLC13A5Q86YT5 568 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-206ENST00000519115 LGI2Q8N0V4 545 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 SYNPOQ8N3V7 929 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 EMC1Q8N766 993 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 JOSD2Q8TAC2 188 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 WFDC5Q8TCV5 224 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 USP33Q8TEY7 942 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 HNRNPLLQ8WVV9 542 aaKnown RBP7.82□□□□□ -1.16
SDCBP-206ENST00000519115 ALG3Q92685 438 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 RNF34Q969K3 372 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 MYEOVQ96EZ4 313 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 CFAP57Q96MR6 1250 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 PRICKLE1Q96MT3 831 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-206ENST00000519115 XPO6Q96QU8 1125 aaKnown RBP7.82□□□□□ -1.16
SDCBP-206ENST00000519115 HHIPQ96QV1 700 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 NPY6RQ99463 290 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 IER2Q9BTL4 223 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 CARD6Q9BX69 1037 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 PIGVQ9NUD9 493 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 CALCOCO1Q9P1Z2 691 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 STIM2Q9P246 746 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 PCYOX1Q9UHG3 505 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 USP18Q9UMW8 372 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 RAD54BQ9Y620 910 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 R4GN57 208 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 CEP192Q8TEP8 1941 aa7.82□□□□□ -1.16
SDCBP-206ENST00000519115 ABCA7Q8IZY2 2146 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 THADAQ6YHU6 1953 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 FAM186AA6NE01 2351 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 GPR179Q6PRD1 2367 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 PRRT4C9JH25 899 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 GFRA2O00451 464 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 KRIT1O00522 736 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 TBL1XO60907 577 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 KLF8O95600 359 aaPredicted RBP7.81□□□□□ -1.16
SDCBP-206ENST00000519115 FGGP02679 453 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 PYGMP11217 842 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms