RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 LCKP06239 509 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 CSF1P09603 554 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 ARHGAP25P42331 645 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 RPS6KA3P51812 740 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 TAF12Q16514 161 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 LRRC24Q50LG9 513 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 MTX3Q5HYI7 312 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 KIAA1755Q5JYT7 1200 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 MAP3K21Q5TCX8 1036 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 ISM2Q6H9L7 571 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 MTFR2Q6P444 385 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 LRIG3Q6UXM1 1119 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 CNGA4Q8IV77 575 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 SCN4BQ8IWT1 228 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 PRSS3P2Q8NHM4 247 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 HERVK_113Q902F9 699 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 USP13Q92995 863 aaPredicted RBP4.07□□□□□ -1.76
VPS13B-207ENST00000518569 VOPP1Q96AW1 172 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 COQ8BQ96D53 544 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 ADAD1Q96M93 576 aaKnown RBP4.07□□□□□ -1.76
VPS13B-207ENST00000518569 TMEM79Q9BSE2 394 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 PIMREGQ9BSJ6 248 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 TUBB6Q9BUF5 446 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.07□□□□□ -1.76
VPS13B-207ENST00000518569 TRIM31Q9BZY9 425 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 RIC8AQ9NPQ8 531 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.07□□□□□ -1.76
VPS13B-207ENST00000518569 THAP1Q9NVV9 213 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 SLC25A13Q9UJS0 675 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 GJD2Q9UKL4 321 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 SLC8A2Q9UPR5 921 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 TNFRSF18Q9Y5U5 241 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 KIR2DS5A0A0G2JLQ3 304 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 STX16-NPEPL1H3BU86 382 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 KIR2DS3K7RE56 304 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 STX16O14662 325 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 METTL18O95568 372 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 CPA2P48052 419 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 RHAGQ02094 409 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 TLE2Q04725 743 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 PGM5Q15124 567 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 PLK5Q496M5 336 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 GXYLT1Q4G148 440 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 C10orf25Q5T742 122 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 ZNF626Q68DY1 528 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 AADACL2Q6P093 401 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 SYNE3Q6ZMZ3 975 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 GALNT7Q86SF2 657 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 LRRTM4Q86VH4 590 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 KLBQ86Z14 1044 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 ADGRF4Q8IZF3 695 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 ANKRD44Q8N8A2 993 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 FAM110DQ8TAY7 271 aaPredicted RBP4.06□□□□□ -1.76
VPS13B-207ENST00000518569 KCNJ9Q92806 393 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 HERC2P3Q9BVR0 1158 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 HDHD5Q9BXW7 423 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 CLPBQ9H078 707 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 TMEM45AQ9NWC5 275 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 TMEM248Q9NWD8 314 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 SAGE1Q9NXZ1 904 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 KLQ9UEF7 1012 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 CD207Q9UJ71 328 aa4.06□□□□□ -1.76
VPS13B-207ENST00000518569 AGO2Q9UKV8 859 aaKnown RBP4.06□□□□□ -1.76
VPS13B-207ENST00000518569 LRRFIP2Q9Y608 721 aaKnown RBP4.06□□□□□ -1.76
VPS13B-207ENST00000518569 ZMYM2Q9UBW7 1377 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 TRBV5-3A0A0A0MS03 114 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 DPPA5A6NC42 116 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 VWA3AA6NCI4 1184 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 NCAM2O15394 837 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 TLX3O43711 291 aaPredicted RBP4.05□□□□□ -1.76
VPS13B-207ENST00000518569 NFATC1O95644 943 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 WNT1P04628 370 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 CKMT1AP12532 417 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 CYP4B1P13584 511 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 ARSAP15289 507 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 GSTM2P28161 218 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 HOXD9P28356 352 aaPredicted RBP4.05□□□□□ -1.76
VPS13B-207ENST00000518569 MVDP53602 400 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 UBE3AQ05086 875 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 ZNF91Q05481 1191 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 CHRNDQ07001 517 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 SRSF1Q07955 248 aaKnown RBP eCLIP4.05□□□□□ -1.76
VPS13B-207ENST00000518569 SLC12A1Q13621 1099 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 RUNDC3AQ59EK9 446 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 TTC39AQ5SRH9 613 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 SLC30A9Q6PML9 568 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 SLC2A7Q6PXP3 512 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 CYB5R4Q7L1T6 521 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 ANKRD13BQ86YJ7 626 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 CPOQ8IVL8 374 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 SLC44A5Q8NCS7 719 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 LINS1Q8NG48 757 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 C16orf52Q8NHV5 167 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 SH3KBP1Q96B97 665 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 MASTLQ96GX5 879 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 RBM17Q96I25 401 aaKnown RBP4.05□□□□□ -1.76
VPS13B-207ENST00000518569 TBATAQ96M53 351 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 REEP2Q9BRK0 252 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 RMI1Q9H9A7 625 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 IL21RQ9HBE5 538 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms