RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 ARL1P40616 181 aaPredicted RBP3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 PTPN9P43378 593 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 MTNR1AP48039 350 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 RPS6KA3P51812 740 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 EIF3BP55884 814 aaKnown RBP3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SLC37A1P57057 533 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 NXPH1P58417 271 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 GPC5P78333 572 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 OLR1P78380 273 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CEBPZQ03701 1054 aaKnown RBP3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 LMAN2Q12907 356 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 TP53BP2Q13625 1128 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 IRF3Q14653 427 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SLC18A3Q16572 532 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 TMEM266Q2M3C6 531 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 BMP2KLQ5H9B9 411 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 RABL3Q5HYI8 236 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 GPR139Q6DWJ6 353 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 NAA16Q6N069 864 aaPredicted RBP3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CDC73Q6P1J9 531 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 GJB7Q6PEY0 223 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 KIRREL2Q6UWL6 708 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CRELD2Q6UXH1 353 aaPredicted RBP3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SLC39A5Q6ZMH5 540 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 Q6ZWC4 215 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 RRM2BQ7LG56 351 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 GALNT7Q86SF2 657 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 PRPF39Q86UA1 669 aaKnown RBP3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 VSIG1Q86XK7 387 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 ADGRF3Q8IZF5 1079 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SCML4Q8N228 414 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 ENDOVQ8N8Q3 282 aaKnown RBP3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 TMEM116Q8NCL8 245 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CADM4Q8NFZ8 388 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 FEZF2Q8TBJ5 459 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 AKAP1Q92667 903 aaKnown RBP eCLIP3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 ATP6V1E2Q96A05 226 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 JAKMIP2Q96AA8 810 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 GPR78Q96P69 363 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 FMNL2Q96PY5 1086 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SLC38A3Q99624 504 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 NPLQ9BXD5 320 aaPredicted RBP3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 MAK16Q9BXY0 300 aaKnown RBP3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 KLC2Q9H0B6 622 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 KAT14Q9H8E8 782 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SCPEP1Q9HB40 452 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CCDC177Q9NQR7 707 aaPredicted RBP3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 IL1RAPL1Q9NZN1 696 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 EHD2Q9NZN4 543 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 HSPB7Q9UBY9 170 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 AMFRQ9UKV5 643 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CAPN7Q9Y6W3 813 aa3.5□□□□□ -1.85
SCARNA15.2-201ENST00000516409 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 C16orf96A6NNT2 1141 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 MYO1GB0I1T2 1018 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 BTBD18B2RXH4 712 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 GCOM1H8Y6P7 765 aaPredicted RBP3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CEP104O60308 925 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 HBP1O60381 514 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CCNT1O60563 726 aaKnown RBP3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SEC31AO94979 1220 aaKnown RBP3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 ONECUT2O95948 504 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 C1RP00736 705 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 PLATP00750 562 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 GALTP07902 379 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CHRM4P08173 479 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 NR2F6P10588 404 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 ZFXP17010 805 aaPredicted RBP3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 NR4A1P22736 598 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 GSTM2P28161 218 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 DUSP1P28562 367 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 PCSK6P29122 969 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SLC8A1P32418 973 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 UBA7P41226 1012 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 STAT6P42226 847 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 RAP1GAPP47736 663 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 EFNA5P52803 228 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 PPP5CP53041 499 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 ABHD18Q0P651 414 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 TOB2Q14106 344 aaPredicted RBP3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 GPR162Q16538 588 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 VWA1Q6PCB0 445 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 TMEM88Q6PEY1 159 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 GPR149Q86SP6 731 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 LINC00346Q8IVM7 164 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 LAS2Q8IYD9 372 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 ULK2Q8IYT8 1036 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SRFBP1Q8NEF9 429 aaKnown RBP3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 Q8TCH9 128 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 NOC3LQ8WTT2 800 aaKnown RBP3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 ARHGEF2Q92974 986 aaKnown RBP3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SMARCE1Q969G3 411 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 EDC3Q96F86 508 aaKnown RBP3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 FBXL20Q96IG2 436 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CMTM3Q96MX0 182 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SNX18Q96RF0 628 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 POLR1BQ9H9Y6 1135 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SNX15Q9NRS6 342 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 KLC4Q9NSK0 619 aa3.49□□□□□ -1.85
SCARNA15.2-201ENST00000516409 C20orf141Q9NUB4 165 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms